RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C21orf2O43822 256 aa22■■□□□ 1.11
TSR3-202ENST00000566296 MCM10Q7L590 875 aa22■■□□□ 1.11
TSR3-202ENST00000566296 CNKSR1Q969H4 720 aa22■■□□□ 1.11
TSR3-202ENST00000566296 KLRG1Q96E93 195 aa22■■□□□ 1.11
TSR3-202ENST00000566296 USP16Q9Y5T5 823 aa22■■□□□ 1.11
TSR3-202ENST00000566296 PIP4K2AP48426 406 aaPredicted RBP21.99■■□□□ 1.11
TSR3-202ENST00000566296 HTRA3P83110 453 aa21.99■■□□□ 1.11
TSR3-202ENST00000566296 STYK1Q6J9G0 422 aa21.99■■□□□ 1.11
TSR3-202ENST00000566296 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
TSR3-202ENST00000566296 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
TSR3-202ENST00000566296 NEFMP07197 916 aa21.98■■□□□ 1.11
TSR3-202ENST00000566296 SOGA3Q5TF21 947 aa21.98■■□□□ 1.11
TSR3-202ENST00000566296 DPY19L2Q6NUT2 758 aa21.98■■□□□ 1.11
TSR3-202ENST00000566296 LAMB4A4D0S4 1761 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 SLX4Q8IY92 1834 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 ERFEQ4G0M1 354 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 CLEC4GQ6UXB4 293 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
TSR3-202ENST00000566296 MASTLQ96GX5 879 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 LTBP3Q9NS15 1303 aa21.97■■□□□ 1.11
TSR3-202ENST00000566296 SRGNP10124 158 aa21.96■■□□□ 1.11
TSR3-202ENST00000566296 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
TSR3-202ENST00000566296 PRPF40BQ6NWY9 871 aaKnown RBP21.96■■□□□ 1.11
TSR3-202ENST00000566296 RGL2O15211 777 aa21.94■■□□□ 1.1
TSR3-202ENST00000566296 DLG5Q8TDM6 1919 aa21.92■■□□□ 1.1
TSR3-202ENST00000566296 TAF7Q15545 349 aaPredicted RBP21.92■■□□□ 1.1
TSR3-202ENST00000566296 JMYQ8N9B5 988 aa21.92■■□□□ 1.1
TSR3-202ENST00000566296 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
TSR3-202ENST00000566296 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
TSR3-202ENST00000566296 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
TSR3-202ENST00000566296 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
TSR3-202ENST00000566296 KDM3BQ7LBC6 1761 aa21.91■■□□□ 1.1
TSR3-202ENST00000566296 NPR1P16066 1061 aa21.9■■□□□ 1.1
TSR3-202ENST00000566296 CCDC93Q567U6 631 aa21.9■■□□□ 1.1
TSR3-202ENST00000566296 TPTE2Q6XPS3 522 aa21.9■■□□□ 1.1
TSR3-202ENST00000566296 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
TSR3-202ENST00000566296 FAM177BA6PVY3 158 aa21.87■■□□□ 1.09
TSR3-202ENST00000566296 POTECB2RU33 542 aa21.87■■□□□ 1.09
TSR3-202ENST00000566296 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
TSR3-202ENST00000566296 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
TSR3-202ENST00000566296 MAPK8IP3Q9UPT6 1336 aa21.85■■□□□ 1.09
TSR3-202ENST00000566296 KLRG2A4D1S0 409 aaPredicted RBP21.85■■□□□ 1.09
TSR3-202ENST00000566296 DDNO94850 711 aaPredicted RBP21.85■■□□□ 1.09
TSR3-202ENST00000566296 IQCA1LA6NCM1 817 aa21.84■■□□□ 1.09
TSR3-202ENST00000566296 FKBP4Q02790 459 aaKnown RBP eCLIP21.84■■□□□ 1.09
TSR3-202ENST00000566296 HLFQ16534 295 aa21.84■■□□□ 1.09
TSR3-202ENST00000566296 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
TSR3-202ENST00000566296 NYXQ9GZU5 481 aa21.84■■□□□ 1.09
TSR3-202ENST00000566296 PNNQ9H307 717 aaKnown RBP21.84■■□□□ 1.09
TSR3-202ENST00000566296 SCN4AP35499 1836 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 NUP98P52948 1817 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 NFE2L2Q16236 605 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 NGEFQ8N5V2 710 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 C7orf43Q8WVR3 580 aa21.83■■□□□ 1.09
TSR3-202ENST00000566296 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
TSR3-202ENST00000566296 RTKN2Q8IZC4 609 aa21.82■■□□□ 1.08
TSR3-202ENST00000566296 MAP3K15Q6ZN16 1313 aa21.81■■□□□ 1.08
TSR3-202ENST00000566296 ERVV-1B6SEH8 477 aa21.81■■□□□ 1.08
TSR3-202ENST00000566296 EIF4A1P60842 406 aaKnown RBP21.81■■□□□ 1.08
TSR3-202ENST00000566296 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
TSR3-202ENST00000566296 ZNF277Q9NRM2 450 aaPredicted RBP21.81■■□□□ 1.08
TSR3-202ENST00000566296 ABCC12Q96J65 1359 aa21.81■■□□□ 1.08
TSR3-202ENST00000566296 IBTKQ9P2D0 1353 aaPredicted RBP21.8■■□□□ 1.08
TSR3-202ENST00000566296 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
TSR3-202ENST00000566296 L3MBTL3Q96JM7 780 aaPredicted RBP21.79■■□□□ 1.08
TSR3-202ENST00000566296 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
TSR3-202ENST00000566296 MYL6BP14649 208 aa21.78■■□□□ 1.08
TSR3-202ENST00000566296 LDHDQ86WU2 507 aa21.78■■□□□ 1.08
TSR3-202ENST00000566296 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
TSR3-202ENST00000566296 CREBZFQ9NS37 354 aa21.78■■□□□ 1.08
TSR3-202ENST00000566296 ERBB4Q15303 1308 aa21.78■■□□□ 1.08
TSR3-202ENST00000566296 POTEIP0CG38 1075 aa21.77■■□□□ 1.08
TSR3-202ENST00000566296 POTEJP0CG39 1038 aa21.77■■□□□ 1.08
TSR3-202ENST00000566296 HSPA1AP0DMV8 641 aaKnown RBP21.77■■□□□ 1.08
TSR3-202ENST00000566296 HSPA1BP0DMV9 641 aaKnown RBP21.77■■□□□ 1.08
TSR3-202ENST00000566296 IARSP41252 1262 aaKnown RBP21.77■■□□□ 1.08
TSR3-202ENST00000566296 OLFM4Q6UX06 510 aa21.77■■□□□ 1.08
TSR3-202ENST00000566296 TTLL7Q6ZT98 887 aa21.77■■□□□ 1.08
TSR3-202ENST00000566296 TAF1DQ9H5J8 278 aaPredicted RBP21.77■■□□□ 1.08
TSR3-202ENST00000566296 RIC1Q4ADV7 1423 aa21.77■■□□□ 1.08
TSR3-202ENST00000566296 ZNF541Q9H0D2 1346 aa21.77■■□□□ 1.07
TSR3-202ENST00000566296 GPTP24298 496 aa21.76■■□□□ 1.07
TSR3-202ENST00000566296 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
TSR3-202ENST00000566296 COL13A1Q5TAT6 717 aaPredicted RBP21.76■■□□□ 1.07
TSR3-202ENST00000566296 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
TSR3-202ENST00000566296 ZBTB3Q9H5J0 574 aa21.76■■□□□ 1.07
TSR3-202ENST00000566296 CC2D2BQ6DHV5 1058 aa21.75■■□□□ 1.07
TSR3-202ENST00000566296 SYNE4Q8N205 404 aa21.75■■□□□ 1.07
TSR3-202ENST00000566296 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
TSR3-202ENST00000566296 EAPPQ56P03 285 aaPredicted RBP21.74■■□□□ 1.07
TSR3-202ENST00000566296 PSMD1Q99460 953 aa21.74■■□□□ 1.07
TSR3-202ENST00000566296 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
TSR3-202ENST00000566296 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
TSR3-202ENST00000566296 TNS4Q8IZW8 715 aa21.73■■□□□ 1.07
TSR3-202ENST00000566296 JDP2Q8WYK2 163 aa21.73■■□□□ 1.07
TSR3-202ENST00000566296 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
TSR3-202ENST00000566296 MKRN1Q9UHC7 482 aaKnown RBP21.72■■□□□ 1.07
TSR3-202ENST00000566296 FZD9O00144 591 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms