RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
TCF4-232ENST00000566286 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
TCF4-232ENST00000566286 AOX1Q06278 1338 aa13.21□□□□□ -0.29
TCF4-232ENST00000566286 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.3
TCF4-232ENST00000566286 PALD1Q9ULE6 856 aa13.21□□□□□ -0.3
TCF4-232ENST00000566286 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.3
TCF4-232ENST00000566286 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
TCF4-232ENST00000566286 GPR37O15354 613 aa13.2□□□□□ -0.3
TCF4-232ENST00000566286 AMHR2Q16671 573 aa13.2□□□□□ -0.3
TCF4-232ENST00000566286 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
TCF4-232ENST00000566286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
TCF4-232ENST00000566286 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
TCF4-232ENST00000566286 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 CACNA1FO60840 1977 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 OVOS2A0A0J9YW53 1432 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 OVOS2Q6IE36 1432 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
TCF4-232ENST00000566286 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
TCF4-232ENST00000566286 CCDC183Q5T5S1 534 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
TCF4-232ENST00000566286 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
TCF4-232ENST00000566286 SETD1BQ9UPS6 1966 aaKnown RBP13.19□□□□□ -0.3
TCF4-232ENST00000566286 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
TCF4-232ENST00000566286 F6X3S4 739 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 G2E3Q7L622 706 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 ACEP12821 1306 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
TCF4-232ENST00000566286 USP6P35125 1406 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 TCHHQ07283 1943 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 FAM208AQ9UK61 1670 aaKnown RBP13.17□□□□□ -0.3
TCF4-232ENST00000566286 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 HSPA4P34932 840 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 KCNA1Q09470 495 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 TSHZ3Q63HK5 1081 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
TCF4-232ENST00000566286 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
TCF4-232ENST00000566286 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
TCF4-232ENST00000566286 KCNA6P17658 529 aa13.16□□□□□ -0.3
TCF4-232ENST00000566286 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 SMAP1Q8IYB5 467 aaPredicted RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
TCF4-232ENST00000566286 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
TCF4-232ENST00000566286 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
TCF4-232ENST00000566286 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 UBE2HP62256 183 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
TCF4-232ENST00000566286 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
TCF4-232ENST00000566286 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
TCF4-232ENST00000566286 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
TCF4-232ENST00000566286 RAD50Q92878 1312 aa13.14□□□□□ -0.31
TCF4-232ENST00000566286 ZSCAN22P10073 491 aaPredicted RBP13.14□□□□□ -0.31
TCF4-232ENST00000566286 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCF4-232ENST00000566286 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCF4-232ENST00000566286 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
TCF4-232ENST00000566286 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
TCF4-232ENST00000566286 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
TCF4-232ENST00000566286 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 ADCY5O95622 1261 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
TCF4-232ENST00000566286 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
TCF4-232ENST00000566286 USP25Q9UHP3 1055 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 KDRP35968 1356 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 LRRC37A3O60309 1634 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 PDE4CQ08493 712 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 FOXD4L6Q3SYB3 417 aaPredicted RBP13.13□□□□□ -0.31
TCF4-232ENST00000566286 FOXD4L3Q6VB84 417 aaPredicted RBP13.13□□□□□ -0.31
TCF4-232ENST00000566286 IGSF5Q9NSI5 407 aa13.13□□□□□ -0.31
TCF4-232ENST00000566286 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 TPM3P06753 285 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 MFSD10Q14728 455 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 STX6O43752 255 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 LIMCH1Q9UPQ0 1083 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
TCF4-232ENST00000566286 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
TCF4-232ENST00000566286 IRF6O14896 467 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 SGSM2O43147 1006 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 KDM4AO75164 1064 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
TCF4-232ENST00000566286 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 TTC14Q96N46 770 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 FLT4P35916 1363 aa13.11□□□□□ -0.31
TCF4-232ENST00000566286 FOXO3O43524 673 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms