RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 IQCA1LA6NCM1 817 aa19.64■□□□□ 0.73
VAC14-206ENST00000564685 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
VAC14-206ENST00000564685 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
VAC14-206ENST00000564685 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
VAC14-206ENST00000564685 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
VAC14-206ENST00000564685 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
VAC14-206ENST00000564685 CNTNAP1P78357 1384 aa19.62■□□□□ 0.73
VAC14-206ENST00000564685 FOXN1O15353 648 aa19.62■□□□□ 0.73
VAC14-206ENST00000564685 PASKQ96RG2 1323 aa19.61■□□□□ 0.73
VAC14-206ENST00000564685 SCN4AP35499 1836 aa19.61■□□□□ 0.73
VAC14-206ENST00000564685 DZIP3Q86Y13 1208 aaKnown RBP19.61■□□□□ 0.73
VAC14-206ENST00000564685 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
VAC14-206ENST00000564685 TAF1DQ9H5J8 278 aaPredicted RBP19.61■□□□□ 0.73
VAC14-206ENST00000564685 ARFGEF2Q9Y6D5 1785 aa19.61■□□□□ 0.73
VAC14-206ENST00000564685 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
VAC14-206ENST00000564685 PER1O15534 1290 aaPredicted RBP19.6■□□□□ 0.73
VAC14-206ENST00000564685 CCDC93Q567U6 631 aa19.6■□□□□ 0.73
VAC14-206ENST00000564685 NBPF5PQ86XG9 351 aaPredicted RBP19.6■□□□□ 0.73
VAC14-206ENST00000564685 C7orf43Q8WVR3 580 aa19.6■□□□□ 0.73
VAC14-206ENST00000564685 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
VAC14-206ENST00000564685 KCNQ3O43525 872 aa19.59■□□□□ 0.73
VAC14-206ENST00000564685 AIDAQ96BJ3 306 aa19.59■□□□□ 0.73
VAC14-206ENST00000564685 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
VAC14-206ENST00000564685 BCORQ6W2J9 1755 aa19.58■□□□□ 0.73
VAC14-206ENST00000564685 TMEM88BA6NKF7 163 aa19.58■□□□□ 0.72
VAC14-206ENST00000564685 NPR1P16066 1061 aa19.58■□□□□ 0.72
VAC14-206ENST00000564685 CTCFP49711 727 aaPredicted RBP19.58■□□□□ 0.72
VAC14-206ENST00000564685 VEGFBP49765 207 aa19.58■□□□□ 0.72
VAC14-206ENST00000564685 EAPPQ56P03 285 aaPredicted RBP19.58■□□□□ 0.72
VAC14-206ENST00000564685 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
VAC14-206ENST00000564685 COL3A1P02461 1466 aaPredicted RBP19.57■□□□□ 0.72
VAC14-206ENST00000564685 ITGBL1O95965 494 aaPredicted RBP19.57■□□□□ 0.72
VAC14-206ENST00000564685 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
VAC14-206ENST00000564685 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
VAC14-206ENST00000564685 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
VAC14-206ENST00000564685 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
VAC14-206ENST00000564685 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
VAC14-206ENST00000564685 FKBP4Q02790 459 aaKnown RBP eCLIP19.56■□□□□ 0.72
VAC14-206ENST00000564685 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
VAC14-206ENST00000564685 HACL1Q9UJ83 578 aa19.56■□□□□ 0.72
VAC14-206ENST00000564685 CLEC11AQ9Y240 323 aa19.56■□□□□ 0.72
VAC14-206ENST00000564685 ZNF541Q9H0D2 1346 aa19.55■□□□□ 0.72
VAC14-206ENST00000564685 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
VAC14-206ENST00000564685 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
VAC14-206ENST00000564685 EPHX2P34913 555 aa19.54■□□□□ 0.72
VAC14-206ENST00000564685 RTKN2Q8IZC4 609 aa19.54■□□□□ 0.72
VAC14-206ENST00000564685 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
VAC14-206ENST00000564685 PRAMEF22A3QJZ6 481 aa19.53■□□□□ 0.72
VAC14-206ENST00000564685 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
VAC14-206ENST00000564685 OLFM4Q6UX06 510 aa19.53■□□□□ 0.72
VAC14-206ENST00000564685 WBP1LQ9NX94 342 aa19.53■□□□□ 0.72
VAC14-206ENST00000564685 NIP7Q9Y221 180 aaKnown RBP eCLIP19.53■□□□□ 0.72
VAC14-206ENST00000564685 PRKAR2BP31323 418 aa19.52■□□□□ 0.72
VAC14-206ENST00000564685 PNMA8AQ86V59 439 aaPredicted RBP19.52■□□□□ 0.72
VAC14-206ENST00000564685 FAM177BA6PVY3 158 aa19.51■□□□□ 0.71
VAC14-206ENST00000564685 LBX1P52954 281 aa19.51■□□□□ 0.71
VAC14-206ENST00000564685 CNTROBQ8N137 903 aa19.51■□□□□ 0.71
VAC14-206ENST00000564685 NPC1L1Q9UHC9 1359 aa19.5■□□□□ 0.71
VAC14-206ENST00000564685 ALDH1B1P30837 517 aa19.5■□□□□ 0.71
VAC14-206ENST00000564685 IARSP41252 1262 aaKnown RBP19.5■□□□□ 0.71
VAC14-206ENST00000564685 MAP1SQ66K74 1059 aaPredicted RBP19.5■□□□□ 0.71
VAC14-206ENST00000564685 SYNE4Q8N205 404 aa19.5■□□□□ 0.71
VAC14-206ENST00000564685 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
VAC14-206ENST00000564685 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
VAC14-206ENST00000564685 RASSF10A6NK89 507 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 NBPF26B4DH59 902 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 FZD9O00144 591 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 RGL2O15211 777 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 GTF2E1P29083 439 aaPredicted RBP19.49■□□□□ 0.71
VAC14-206ENST00000564685 DEFB115Q30KQ5 88 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 NBPF10Q6P3W6 841 aaKnown RBP19.49■□□□□ 0.71
VAC14-206ENST00000564685 NBPF15Q8N660 670 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
VAC14-206ENST00000564685 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 ADAMTSL1Q8N6G6 1762 aa19.49■□□□□ 0.71
VAC14-206ENST00000564685 GPC2Q8N158 579 aa19.48■□□□□ 0.71
VAC14-206ENST00000564685 MCM10Q7L590 875 aa19.47■□□□□ 0.71
VAC14-206ENST00000564685 JDP2Q8WYK2 163 aa19.47■□□□□ 0.71
VAC14-206ENST00000564685 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
VAC14-206ENST00000564685 ABT1Q9ULW3 272 aaKnown RBP19.47■□□□□ 0.71
VAC14-206ENST00000564685 MAP2K1Q02750 393 aaPredicted RBP19.46■□□□□ 0.71
VAC14-206ENST00000564685 HLFQ16534 295 aa19.46■□□□□ 0.71
VAC14-206ENST00000564685 WDR33Q9C0J8 1336 aaKnown RBP19.46■□□□□ 0.71
VAC14-206ENST00000564685 HSPA8P11142 646 aaKnown RBP19.45■□□□□ 0.7
VAC14-206ENST00000564685 PSMD1Q99460 953 aa19.45■□□□□ 0.7
VAC14-206ENST00000564685 NUDCQ9Y266 331 aa19.45■□□□□ 0.7
VAC14-206ENST00000564685 EIF6P56537 245 aaKnown RBP19.44■□□□□ 0.7
VAC14-206ENST00000564685 GJA3Q9Y6H8 435 aa19.44■□□□□ 0.7
VAC14-206ENST00000564685 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
VAC14-206ENST00000564685 LMOD1P29536 600 aaPredicted RBP19.43■□□□□ 0.7
VAC14-206ENST00000564685 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
VAC14-206ENST00000564685 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
VAC14-206ENST00000564685 ABHD8Q96I13 439 aa19.43■□□□□ 0.7
VAC14-206ENST00000564685 NYXQ9GZU5 481 aa19.43■□□□□ 0.7
VAC14-206ENST00000564685 DDX21Q9NR30 783 aaKnown RBP eCLIP19.43■□□□□ 0.7
VAC14-206ENST00000564685 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
VAC14-206ENST00000564685 CRY2Q49AN0 593 aa19.42■□□□□ 0.7
VAC14-206ENST00000564685 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
VAC14-206ENST00000564685 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
VAC14-206ENST00000564685 NUTM1Q86Y26 1132 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms