RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 BCORQ6W2J9 1755 aa25.04■■□□□ 1.6
NME3-207ENST00000564628 CNKSR1Q969H4 720 aa25.04■■□□□ 1.6
NME3-207ENST00000564628 PLEKHF1Q96S99 279 aa25.04■■□□□ 1.6
NME3-207ENST00000564628 POTECB2RU33 542 aa25.03■■□□□ 1.6
NME3-207ENST00000564628 ST5P78524 1137 aa25.03■■□□□ 1.6
NME3-207ENST00000564628 ERFEQ4G0M1 354 aa25.03■■□□□ 1.6
NME3-207ENST00000564628 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
NME3-207ENST00000564628 CCDC24Q8N4L8 307 aa25.03■■□□□ 1.6
NME3-207ENST00000564628 KCNQ3O43525 872 aa25.02■■□□□ 1.6
NME3-207ENST00000564628 DZIP3Q86Y13 1208 aaKnown RBP25.02■■□□□ 1.6
NME3-207ENST00000564628 TAOK3Q9H2K8 898 aa25.02■■□□□ 1.6
NME3-207ENST00000564628 NPHP1O15259 732 aa25.01■■□□□ 1.59
NME3-207ENST00000564628 SRGNP10124 158 aa25.01■■□□□ 1.59
NME3-207ENST00000564628 SOGA3Q5TF21 947 aa25.01■■□□□ 1.59
NME3-207ENST00000564628 CLEC4GQ6UXB4 293 aa25■■□□□ 1.59
NME3-207ENST00000564628 MASTLQ96GX5 879 aa25■■□□□ 1.59
NME3-207ENST00000564628 ZNF219Q9P2Y4 722 aaPredicted RBP25■■□□□ 1.59
NME3-207ENST00000564628 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
NME3-207ENST00000564628 COL13A1Q5TAT6 717 aaPredicted RBP24.99■■□□□ 1.59
NME3-207ENST00000564628 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
NME3-207ENST00000564628 USP16Q9Y5T5 823 aa24.99■■□□□ 1.59
NME3-207ENST00000564628 RGL2O15211 777 aa24.98■■□□□ 1.59
NME3-207ENST00000564628 PNNQ9H307 717 aaKnown RBP24.98■■□□□ 1.59
NME3-207ENST00000564628 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
NME3-207ENST00000564628 SNRPA1P09661 255 aaKnown RBP24.97■■□□□ 1.59
NME3-207ENST00000564628 ZNF652Q9Y2D9 606 aa24.97■■□□□ 1.59
NME3-207ENST00000564628 HTATSF1O43719 755 aaKnown RBP24.96■■□□□ 1.59
NME3-207ENST00000564628 RTF1Q92541 710 aaKnown RBP24.96■■□□□ 1.59
NME3-207ENST00000564628 NBPF5PQ86XG9 351 aaPredicted RBP24.95■■□□□ 1.58
NME3-207ENST00000564628 PCNTO95613 3336 aa24.94■■□□□ 1.58
NME3-207ENST00000564628 PRAMEF22A3QJZ6 481 aa24.94■■□□□ 1.58
NME3-207ENST00000564628 NEFMP07197 916 aa24.94■■□□□ 1.58
NME3-207ENST00000564628 NFE2L2Q16236 605 aa24.94■■□□□ 1.58
NME3-207ENST00000564628 CACNA1SQ13698 1873 aa24.94■■□□□ 1.58
NME3-207ENST00000564628 MAPK8IP3Q9UPT6 1336 aa24.93■■□□□ 1.58
NME3-207ENST00000564628 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
NME3-207ENST00000564628 ANP32CO43423 234 aa24.93■■□□□ 1.58
NME3-207ENST00000564628 PIP4K2AP48426 406 aaPredicted RBP24.93■■□□□ 1.58
NME3-207ENST00000564628 MCM10Q7L590 875 aa24.93■■□□□ 1.58
NME3-207ENST00000564628 C7orf43Q8WVR3 580 aa24.93■■□□□ 1.58
NME3-207ENST00000564628 WDR43Q15061 677 aaKnown RBP eCLIP24.92■■□□□ 1.58
NME3-207ENST00000564628 CHADLQ6NUI6 762 aa24.92■■□□□ 1.58
NME3-207ENST00000564628 DDNO94850 711 aaPredicted RBP24.91■■□□□ 1.58
NME3-207ENST00000564628 NPR1P16066 1061 aa24.91■■□□□ 1.58
NME3-207ENST00000564628 TPTE2Q6XPS3 522 aa24.91■■□□□ 1.58
NME3-207ENST00000564628 ADAMTS8Q9UP79 889 aa24.91■■□□□ 1.58
NME3-207ENST00000564628 NBPF26B4DH59 902 aa24.9■■□□□ 1.58
NME3-207ENST00000564628 CCDC184Q52MB2 194 aa24.9■■□□□ 1.58
NME3-207ENST00000564628 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
NME3-207ENST00000564628 NBPF10Q6P3W6 841 aaKnown RBP24.9■■□□□ 1.58
NME3-207ENST00000564628 NBPF15Q8N660 670 aa24.9■■□□□ 1.58
NME3-207ENST00000564628 IQCA1LA6NCM1 817 aa24.89■■□□□ 1.58
NME3-207ENST00000564628 HSPA1AP0DMV8 641 aaKnown RBP24.89■■□□□ 1.58
NME3-207ENST00000564628 HSPA1BP0DMV9 641 aaKnown RBP24.89■■□□□ 1.58
NME3-207ENST00000564628 L3MBTL3Q96JM7 780 aaPredicted RBP24.89■■□□□ 1.58
NME3-207ENST00000564628 CREBZFQ9NS37 354 aa24.89■■□□□ 1.58
NME3-207ENST00000564628 TNS4Q8IZW8 715 aa24.88■■□□□ 1.57
NME3-207ENST00000564628 NIP7Q9Y221 180 aaKnown RBP eCLIP24.88■■□□□ 1.57
NME3-207ENST00000564628 KDM3BQ7LBC6 1761 aa24.88■■□□□ 1.57
NME3-207ENST00000564628 DCTN1Q14203 1278 aa24.87■■□□□ 1.57
NME3-207ENST00000564628 RUNDC1Q96C34 613 aa24.87■■□□□ 1.57
NME3-207ENST00000564628 SCN4AP35499 1836 aa24.86■■□□□ 1.57
NME3-207ENST00000564628 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
NME3-207ENST00000564628 TAF7Q15545 349 aaPredicted RBP24.86■■□□□ 1.57
NME3-207ENST00000564628 POTEIP0CG38 1075 aa24.85■■□□□ 1.57
NME3-207ENST00000564628 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
NME3-207ENST00000564628 TMPOP42166 694 aaKnown RBP24.85■■□□□ 1.57
NME3-207ENST00000564628 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
NME3-207ENST00000564628 RTKN2Q8IZC4 609 aa24.85■■□□□ 1.57
NME3-207ENST00000564628 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
NME3-207ENST00000564628 LDHDQ86WU2 507 aa24.84■■□□□ 1.57
NME3-207ENST00000564628 ALDH1B1P30837 517 aa24.83■■□□□ 1.57
NME3-207ENST00000564628 TAF1DQ9H5J8 278 aaPredicted RBP24.83■■□□□ 1.57
NME3-207ENST00000564628 PASKQ96RG2 1323 aa24.82■■□□□ 1.56
NME3-207ENST00000564628 RIPK4P57078 832 aa24.81■■□□□ 1.56
NME3-207ENST00000564628 HLFQ16534 295 aa24.81■■□□□ 1.56
NME3-207ENST00000564628 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
NME3-207ENST00000564628 ZNF277Q9NRM2 450 aaPredicted RBP24.81■■□□□ 1.56
NME3-207ENST00000564628 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
NME3-207ENST00000564628 FAM177BA6PVY3 158 aa24.79■■□□□ 1.56
NME3-207ENST00000564628 GTF2E1P29083 439 aaPredicted RBP24.79■■□□□ 1.56
NME3-207ENST00000564628 CRY2Q49AN0 593 aa24.79■■□□□ 1.56
NME3-207ENST00000564628 THUMPD2Q9BTF0 503 aaKnown RBP24.79■■□□□ 1.56
NME3-207ENST00000564628 NYXQ9GZU5 481 aa24.79■■□□□ 1.56
NME3-207ENST00000564628 MRS2Q9HD23 443 aa24.79■■□□□ 1.56
NME3-207ENST00000564628 MKRN1Q9UHC7 482 aaKnown RBP24.79■■□□□ 1.56
NME3-207ENST00000564628 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
NME3-207ENST00000564628 LMOD3Q0VAK6 560 aa24.78■■□□□ 1.56
NME3-207ENST00000564628 OLFM4Q6UX06 510 aa24.78■■□□□ 1.56
NME3-207ENST00000564628 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
NME3-207ENST00000564628 CNTNAP1P78357 1384 aa24.78■■□□□ 1.56
NME3-207ENST00000564628 FZD9O00144 591 aa24.77■■□□□ 1.56
NME3-207ENST00000564628 IARSP41252 1262 aaKnown RBP24.77■■□□□ 1.56
NME3-207ENST00000564628 HACL1Q9UJ83 578 aa24.77■■□□□ 1.56
NME3-207ENST00000564628 RRP7AQ9Y3A4 280 aaKnown RBP24.77■■□□□ 1.56
NME3-207ENST00000564628 SNED1Q8TER0 1413 aa24.77■■□□□ 1.56
NME3-207ENST00000564628 ADAMTSL1Q8N6G6 1762 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 CAPN15O75808 1086 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 ITGBL1O95965 494 aaPredicted RBP24.76■■□□□ 1.55
NME3-207ENST00000564628 CC2D2BQ6DHV5 1058 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms