RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 COL9A3Q14050 684 aaPredicted RBP6.73□□□□□ -1.33
CHD9-211ENST00000564600 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
CHD9-211ENST00000564600 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHD9-211ENST00000564600 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
CHD9-211ENST00000564600 STARD13Q9Y3M8 1113 aa6.73□□□□□ -1.33
CHD9-211ENST00000564600 EFSO43281 561 aa6.72□□□□□ -1.33
CHD9-211ENST00000564600 DYRK3O43781 588 aa6.72□□□□□ -1.33
CHD9-211ENST00000564600 UCN2Q96RP3 112 aa6.72□□□□□ -1.33
CHD9-211ENST00000564600 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
CHD9-211ENST00000564600 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 SOX11P35716 441 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 MTFR1Q15390 333 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 HDGFL1Q5TGJ6 251 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 SIRT1Q96EB6 747 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 AVENQ9NQS1 362 aaPredicted RBP6.71□□□□□ -1.34
CHD9-211ENST00000564600 ZDHHC3Q9NYG2 299 aa6.71□□□□□ -1.34
CHD9-211ENST00000564600 APBA3O96018 575 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 PROSER2Q86WR7 435 aaPredicted RBP6.7□□□□□ -1.34
CHD9-211ENST00000564600 DEPDC4Q8N2C3 294 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 L3MBTL2Q969R5 705 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 HSH2DQ96JZ2 352 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 MDFIQ99750 246 aa6.7□□□□□ -1.34
CHD9-211ENST00000564600 SKIP12755 728 aa6.69□□□□□ -1.34
CHD9-211ENST00000564600 ALAS2P22557 587 aa6.69□□□□□ -1.34
CHD9-211ENST00000564600 TNS4Q8IZW8 715 aa6.69□□□□□ -1.34
CHD9-211ENST00000564600 ZNF358Q9NW07 568 aa6.69□□□□□ -1.34
CHD9-211ENST00000564600 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
CHD9-211ENST00000564600 PSME1Q06323 249 aa6.68□□□□□ -1.34
CHD9-211ENST00000564600 NCOA4Q13772 614 aa6.68□□□□□ -1.34
CHD9-211ENST00000564600 MAP7D1Q3KQU3 841 aa6.68□□□□□ -1.34
CHD9-211ENST00000564600 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
CHD9-211ENST00000564600 MICALL1Q8N3F8 863 aa6.68□□□□□ -1.34
CHD9-211ENST00000564600 NID1P14543 1247 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 NOS2P35228 1153 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 ADH7P40394 386 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 GTF2IP78347 998 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 SAMD5Q5TGI4 173 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 SLC9A9Q8IVB4 645 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 GLMNQ92990 594 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 IGFLR1Q9H665 355 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 ZFP64Q9NPA5 681 aa6.67□□□□□ -1.34
CHD9-211ENST00000564600 SCHIP1Q9P0W5 487 aaPredicted RBP6.67□□□□□ -1.34
CHD9-211ENST00000564600 A6NJR5 290 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 USP17L5A8MUK1 530 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 TRIM28Q13263 835 aaKnown RBP6.66□□□□□ -1.34
CHD9-211ENST00000564600 ARTNQ5T4W7 220 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 WWC1Q8IX03 1113 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 HCN4Q9Y3Q4 1203 aa6.66□□□□□ -1.34
CHD9-211ENST00000564600 EML1O00423 815 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 SIN3BO75182 1162 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 TRAPPC3LQ5T215 181 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 ZNF280CQ8ND82 737 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 NUDT8Q8WV74 236 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 C7orf43Q8WVR3 580 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.34
CHD9-211ENST00000564600 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 SELPP16109 830 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 EPHA4P54764 986 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 RHPN1Q8TCX5 695 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 BHMTQ93088 406 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 NEUROD4Q9HD90 331 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
CHD9-211ENST00000564600 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 SPDYE3A6NKU9 549 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 SFI1A8K8P3 1242 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 ATP9BO43861 1147 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 CLDN10P78369 228 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 LAMC2Q13753 1193 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 TEAD4Q15561 434 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 EML3Q32P44 896 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 C20orf204Q6ZNR8 217 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 NBPF11Q86T75 865 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 TNFRSF25Q93038 417 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 BRD7Q9NPI1 651 aa6.63□□□□□ -1.35
CHD9-211ENST00000564600 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
CHD9-211ENST00000564600 MBTPS1Q14703 1052 aa6.62□□□□□ -1.35
CHD9-211ENST00000564600 TSPAN10Q9H1Z9 355 aaPredicted RBP6.62□□□□□ -1.35
CHD9-211ENST00000564600 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
CHD9-211ENST00000564600 ZNF777Q9ULD5 760 aaPredicted RBP6.62□□□□□ -1.35
CHD9-211ENST00000564600 NOD1Q9Y239 953 aa6.62□□□□□ -1.35
CHD9-211ENST00000564600 A0A0A0MRY4 1105 aa6.61□□□□□ -1.35
CHD9-211ENST00000564600 SERTM1A2A2V5 107 aa6.61□□□□□ -1.35
CHD9-211ENST00000564600 BACH1O14867 736 aa6.61□□□□□ -1.35
CHD9-211ENST00000564600 NRG1Q02297 640 aaPredicted RBP6.61□□□□□ -1.35
CHD9-211ENST00000564600 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
CHD9-211ENST00000564600 GAS2L2Q8NHY3 880 aa6.61□□□□□ -1.35
CHD9-211ENST00000564600 UBE2OQ9C0C9 1292 aaKnown RBP6.61□□□□□ -1.35
CHD9-211ENST00000564600 PALM3A6NDB9 673 aaPredicted RBP6.6□□□□□ -1.35
CHD9-211ENST00000564600 LGR5O75473 907 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms