RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
COX4I1-206ENST00000564544 RGL2O15211 777 aa18.17■□□□□ 0.5
COX4I1-206ENST00000564544 CAPN15O75808 1086 aa18.17■□□□□ 0.5
COX4I1-206ENST00000564544 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
COX4I1-206ENST00000564544 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
COX4I1-206ENST00000564544 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
COX4I1-206ENST00000564544 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
COX4I1-206ENST00000564544 DDNO94850 711 aaPredicted RBP18.15■□□□□ 0.5
COX4I1-206ENST00000564544 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
COX4I1-206ENST00000564544 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.49
COX4I1-206ENST00000564544 NPR1P16066 1061 aa18.14■□□□□ 0.49
COX4I1-206ENST00000564544 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
COX4I1-206ENST00000564544 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
COX4I1-206ENST00000564544 LDHDQ86WU2 507 aa18.14■□□□□ 0.49
COX4I1-206ENST00000564544 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
COX4I1-206ENST00000564544 L3MBTL3Q96JM7 780 aaPredicted RBP18.14■□□□□ 0.49
COX4I1-206ENST00000564544 FER1L6Q2WGJ9 1857 aa18.14■□□□□ 0.49
COX4I1-206ENST00000564544 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
COX4I1-206ENST00000564544 COL11A2P13942 1736 aaPredicted RBP18.12■□□□□ 0.49
COX4I1-206ENST00000564544 DICER1Q9UPY3 1922 aaKnown RBP18.12■□□□□ 0.49
COX4I1-206ENST00000564544 KCNQ3O43525 872 aa18.12■□□□□ 0.49
COX4I1-206ENST00000564544 C7orf43Q8WVR3 580 aa18.12■□□□□ 0.49
COX4I1-206ENST00000564544 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
COX4I1-206ENST00000564544 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
COX4I1-206ENST00000564544 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
COX4I1-206ENST00000564544 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
COX4I1-206ENST00000564544 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
COX4I1-206ENST00000564544 KLRG2A4D1S0 409 aaPredicted RBP18.11■□□□□ 0.49
COX4I1-206ENST00000564544 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
COX4I1-206ENST00000564544 RTKN2Q8IZC4 609 aa18.11■□□□□ 0.49
COX4I1-206ENST00000564544 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
COX4I1-206ENST00000564544 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
COX4I1-206ENST00000564544 CNTNAP1P78357 1384 aa18.09■□□□□ 0.49
COX4I1-206ENST00000564544 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
COX4I1-206ENST00000564544 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
COX4I1-206ENST00000564544 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
COX4I1-206ENST00000564544 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
COX4I1-206ENST00000564544 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
COX4I1-206ENST00000564544 POTEJP0CG39 1038 aa18.08■□□□□ 0.48
COX4I1-206ENST00000564544 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
COX4I1-206ENST00000564544 HACL1Q9UJ83 578 aa18.08■□□□□ 0.48
COX4I1-206ENST00000564544 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
COX4I1-206ENST00000564544 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
COX4I1-206ENST00000564544 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
COX4I1-206ENST00000564544 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
COX4I1-206ENST00000564544 PIP4K2AP48426 406 aaPredicted RBP18.07■□□□□ 0.48
COX4I1-206ENST00000564544 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
COX4I1-206ENST00000564544 PNMA8AQ86V59 439 aaPredicted RBP18.07■□□□□ 0.48
COX4I1-206ENST00000564544 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
COX4I1-206ENST00000564544 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
COX4I1-206ENST00000564544 EAPPQ56P03 285 aaPredicted RBP18.06■□□□□ 0.48
COX4I1-206ENST00000564544 CC2D2BQ6DHV5 1058 aa18.06■□□□□ 0.48
COX4I1-206ENST00000564544 MCM10Q7L590 875 aa18.06■□□□□ 0.48
COX4I1-206ENST00000564544 PRDM10Q9NQV6 1147 aa18.06■□□□□ 0.48
COX4I1-206ENST00000564544 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
COX4I1-206ENST00000564544 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
COX4I1-206ENST00000564544 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
COX4I1-206ENST00000564544 CLEC11AQ9Y240 323 aa18.05■□□□□ 0.48
COX4I1-206ENST00000564544 SCN4AP35499 1836 aa18.05■□□□□ 0.48
COX4I1-206ENST00000564544 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
COX4I1-206ENST00000564544 EPHX2P34913 555 aa18.04■□□□□ 0.48
COX4I1-206ENST00000564544 IARSP41252 1262 aaKnown RBP18.04■□□□□ 0.48
COX4I1-206ENST00000564544 CTCFP49711 727 aaPredicted RBP18.04■□□□□ 0.48
COX4I1-206ENST00000564544 TAF7Q15545 349 aaPredicted RBP18.04■□□□□ 0.48
COX4I1-206ENST00000564544 GRIPAP1Q4V328 841 aa18.04■□□□□ 0.48
COX4I1-206ENST00000564544 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
COX4I1-206ENST00000564544 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
COX4I1-206ENST00000564544 JDP2Q8WYK2 163 aa18.04■□□□□ 0.48
COX4I1-206ENST00000564544 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 FZD9O00144 591 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
COX4I1-206ENST00000564544 NEFMP07197 916 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 GPC2Q8N158 579 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
COX4I1-206ENST00000564544 PSMD1Q99460 953 aa18.03■□□□□ 0.48
COX4I1-206ENST00000564544 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
COX4I1-206ENST00000564544 FOXN1O15353 648 aa18.02■□□□□ 0.48
COX4I1-206ENST00000564544 PCNTO95613 3336 aa18.02■□□□□ 0.48
COX4I1-206ENST00000564544 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
COX4I1-206ENST00000564544 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
COX4I1-206ENST00000564544 VEGFBP49765 207 aa18.01■□□□□ 0.47
COX4I1-206ENST00000564544 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
COX4I1-206ENST00000564544 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
COX4I1-206ENST00000564544 DCTN1Q14203 1278 aa18■□□□□ 0.47
COX4I1-206ENST00000564544 HLFQ16534 295 aa18■□□□□ 0.47
COX4I1-206ENST00000564544 CNTROBQ8N137 903 aa18■□□□□ 0.47
COX4I1-206ENST00000564544 RASSF10A6NK89 507 aa17.99■□□□□ 0.47
COX4I1-206ENST00000564544 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
COX4I1-206ENST00000564544 OLFM4Q6UX06 510 aa17.99■□□□□ 0.47
COX4I1-206ENST00000564544 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
COX4I1-206ENST00000564544 RPGRQ92834 1020 aaKnown RBP17.99■□□□□ 0.47
COX4I1-206ENST00000564544 CACNA1SQ13698 1873 aa17.99■□□□□ 0.47
COX4I1-206ENST00000564544 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
COX4I1-206ENST00000564544 DEFB115Q30KQ5 88 aa17.98■□□□□ 0.47
COX4I1-206ENST00000564544 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
COX4I1-206ENST00000564544 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
COX4I1-206ENST00000564544 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
COX4I1-206ENST00000564544 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
COX4I1-206ENST00000564544 MAP2K1Q02750 393 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms