RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 CCDC112Q8NEF3 446 aa22.27■■□□□ 1.16
CBFA2T3-205ENST00000563856 APBB1O00213 710 aa22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 PALD1Q9ULE6 856 aa22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 SLIT3O75094 1523 aa22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 RRS1Q15050 365 aaKnown RBP22.26■■□□□ 1.15
CBFA2T3-205ENST00000563856 HAP1P54257 671 aaPredicted RBP22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 NUTM2GQ5VZR2 741 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 GIMAP6Q6P9H5 292 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 DNAJC2Q99543 621 aaKnown RBP22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 CALCOCO1Q9P1Z2 691 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 NFAT5O94916 1531 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 TCHHQ07283 1943 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 EPB41L2O43491 1005 aaKnown RBP22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 PTGS1P23219 599 aa22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 DDX17Q92841 729 aaKnown RBP22.25■■□□□ 1.15
CBFA2T3-205ENST00000563856 C8orf58Q8NAV2 365 aa22.24■■□□□ 1.15
CBFA2T3-205ENST00000563856 TNNT1P13805 278 aa22.24■■□□□ 1.15
CBFA2T3-205ENST00000563856 ZNF397Q8NF99 534 aaPredicted RBP22.24■■□□□ 1.15
CBFA2T3-205ENST00000563856 ANO2Q9NQ90 1003 aa22.24■■□□□ 1.15
CBFA2T3-205ENST00000563856 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
CBFA2T3-205ENST00000563856 FAM200AQ8TCP9 573 aa22.23■■□□□ 1.15
CBFA2T3-205ENST00000563856 C16orf45Q96MC5 204 aaPredicted RBP22.23■■□□□ 1.15
CBFA2T3-205ENST00000563856 LTN1O94822 1766 aa22.22■■□□□ 1.15
CBFA2T3-205ENST00000563856 ZBTB22O15209 634 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 VGLL3A8MV65 326 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 STX6O43752 255 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 F13A1P00488 732 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 SOS2Q07890 1332 aaPredicted RBP22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
CBFA2T3-205ENST00000563856 CRYBG1Q9Y4K1 1723 aa22.2■■□□□ 1.15
CBFA2T3-205ENST00000563856 FIBPO43427 364 aa22.2■■□□□ 1.15
CBFA2T3-205ENST00000563856 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.15
CBFA2T3-205ENST00000563856 UPF3BQ9BZI7 483 aaKnown RBP22.2■■□□□ 1.15
CBFA2T3-205ENST00000563856 PDIA4P13667 645 aaKnown RBP22.2■■□□□ 1.14
CBFA2T3-205ENST00000563856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.2■■□□□ 1.14
CBFA2T3-205ENST00000563856 TSPYL1Q9H0U9 437 aa22.2■■□□□ 1.14
CBFA2T3-205ENST00000563856 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
CBFA2T3-205ENST00000563856 MED1Q15648 1581 aaPredicted RBP22.19■■□□□ 1.14
CBFA2T3-205ENST00000563856 SPATA31A3Q5VYP0 1347 aa22.19■■□□□ 1.14
CBFA2T3-205ENST00000563856 SOX12O15370 315 aa22.19■■□□□ 1.14
CBFA2T3-205ENST00000563856 CHMLP26374 656 aa22.19■■□□□ 1.14
CBFA2T3-205ENST00000563856 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
CBFA2T3-205ENST00000563856 CCDC186Q7Z3E2 898 aa22.18■■□□□ 1.14
CBFA2T3-205ENST00000563856 PTPRCP08575 1304 aa22.18■■□□□ 1.14
CBFA2T3-205ENST00000563856 FLT4P35916 1363 aa22.18■■□□□ 1.14
CBFA2T3-205ENST00000563856 ARHGEF10O15013 1369 aa22.18■■□□□ 1.14
CBFA2T3-205ENST00000563856 FAM53CQ9NYF3 392 aa22.18■■□□□ 1.14
CBFA2T3-205ENST00000563856 SYT1P21579 422 aa22.17■■□□□ 1.14
CBFA2T3-205ENST00000563856 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
CBFA2T3-205ENST00000563856 DRC7Q8IY82 874 aa22.17■■□□□ 1.14
CBFA2T3-205ENST00000563856 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 IL13P35225 146 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 TPD52L1Q16890 204 aaPredicted RBP22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 TPRNQ4KMQ1 711 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 SLFNL1Q499Z3 407 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 ZSCAN25Q6NSZ9 544 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 MEIS3Q99687 375 aa22.16■■□□□ 1.14
CBFA2T3-205ENST00000563856 SALL3Q9BXA9 1300 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 TULP2O00295 520 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 CEP135Q66GS9 1140 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 SMC3Q9UQE7 1217 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 CCDC171Q6TFL3 1326 aa22.15■■□□□ 1.14
CBFA2T3-205ENST00000563856 HSPA4P34932 840 aa22.14■■□□□ 1.14
CBFA2T3-205ENST00000563856 MAP3K11Q16584 847 aa22.14■■□□□ 1.14
CBFA2T3-205ENST00000563856 HMOX1P09601 288 aa22.14■■□□□ 1.13
CBFA2T3-205ENST00000563856 GCP02774 474 aa22.13■■□□□ 1.13
CBFA2T3-205ENST00000563856 LRMPQ12912 555 aa22.13■■□□□ 1.13
CBFA2T3-205ENST00000563856 KMT5BQ4FZB7 885 aa22.13■■□□□ 1.13
CBFA2T3-205ENST00000563856 NAA30Q147X3 362 aaPredicted RBP22.13■■□□□ 1.13
CBFA2T3-205ENST00000563856 TRIM6-TRIM34B2RNG4 842 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 AMPHP49418 695 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 TYRO3Q06418 890 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 RNF20Q5VTR2 975 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 PLA2G4DQ86XP0 818 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 ZNF75DP51815 510 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 HSP90AB2PQ58FF8 381 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 RILPL2Q969X0 211 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 NUP62CLQ9H1M0 184 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 LIMCH1Q9UPQ0 1083 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 MRVI1Q9Y6F6 885 aa22.12■■□□□ 1.13
CBFA2T3-205ENST00000563856 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
CBFA2T3-205ENST00000563856 ERO1AQ96HE7 468 aa22.11■■□□□ 1.13
CBFA2T3-205ENST00000563856 HOXC9P31274 260 aa22.11■■□□□ 1.13
CBFA2T3-205ENST00000563856 LRRCC1Q9C099 1032 aa22.11■■□□□ 1.13
CBFA2T3-205ENST00000563856 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
CBFA2T3-205ENST00000563856 TRIM5Q9C035 493 aa22.1■■□□□ 1.13
CBFA2T3-205ENST00000563856 ABCA3Q99758 1704 aa22.1■■□□□ 1.13
CBFA2T3-205ENST00000563856 NEMFO60524 1076 aa22.1■■□□□ 1.13
CBFA2T3-205ENST00000563856 DNM1Q05193 864 aaKnown RBP22.1■■□□□ 1.13
CBFA2T3-205ENST00000563856 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms