RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NBPF26B4DH59 902 aa23.48■■□□□ 1.35
SMPD3-203ENST00000563226 GCKRQ14397 625 aa23.48■■□□□ 1.35
SMPD3-203ENST00000563226 NBPF14Q5TI25 921 aa23.48■■□□□ 1.35
SMPD3-203ENST00000563226 NBPF10Q6P3W6 841 aaKnown RBP23.48■■□□□ 1.35
SMPD3-203ENST00000563226 NBPF15Q8N660 670 aa23.48■■□□□ 1.35
SMPD3-203ENST00000563226 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
SMPD3-203ENST00000563226 AOX1Q06278 1338 aa23.48■■□□□ 1.35
SMPD3-203ENST00000563226 FRAT2O75474 233 aaPredicted RBP23.48■■□□□ 1.35
SMPD3-203ENST00000563226 LTBP4Q8N2S1 1624 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
SMPD3-203ENST00000563226 RILPL2Q969X0 211 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 AK9Q5TCS8 1911 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 TRIM6-TRIM34B2RNG4 842 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 OS9Q13438 667 aaPredicted RBP23.47■■□□□ 1.35
SMPD3-203ENST00000563226 HSP90AB4PQ58FF6 505 aa23.47■■□□□ 1.35
SMPD3-203ENST00000563226 ERC2O15083 957 aa23.46■■□□□ 1.35
SMPD3-203ENST00000563226 EIF5BO60841 1220 aaKnown RBP23.46■■□□□ 1.35
SMPD3-203ENST00000563226 PI4K2BQ8TCG2 481 aa23.46■■□□□ 1.35
SMPD3-203ENST00000563226 HDAC5Q9UQL6 1122 aa23.46■■□□□ 1.35
SMPD3-203ENST00000563226 JARID2Q92833 1246 aaPredicted RBP23.45■■□□□ 1.35
SMPD3-203ENST00000563226 EPHA10Q5JZY3 1008 aa23.45■■□□□ 1.34
SMPD3-203ENST00000563226 NUP188Q5SRE5 1749 aa23.44■■□□□ 1.34
SMPD3-203ENST00000563226 DISP2A7MBM2 1401 aa23.44■■□□□ 1.34
SMPD3-203ENST00000563226 ATP5J2-PTCD1G3V325 749 aa23.44■■□□□ 1.34
SMPD3-203ENST00000563226 A1BGP04217 495 aa23.44■■□□□ 1.34
SMPD3-203ENST00000563226 ITGB4P16144 1822 aa23.43■■□□□ 1.34
SMPD3-203ENST00000563226 MAP4K4O95819 1239 aaPredicted RBP23.43■■□□□ 1.34
SMPD3-203ENST00000563226 CHMLP26374 656 aa23.43■■□□□ 1.34
SMPD3-203ENST00000563226 ERBB4Q15303 1308 aa23.43■■□□□ 1.34
SMPD3-203ENST00000563226 REC8O95072 547 aa23.42■■□□□ 1.34
SMPD3-203ENST00000563226 TTLL7Q6ZT98 887 aa23.42■■□□□ 1.34
SMPD3-203ENST00000563226 PLBD2Q8NHP8 589 aa23.42■■□□□ 1.34
SMPD3-203ENST00000563226 ESYT1Q9BSJ8 1104 aa23.42■■□□□ 1.34
SMPD3-203ENST00000563226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.42■■□□□ 1.34
SMPD3-203ENST00000563226 TMOD3Q9NYL9 352 aa23.41■■□□□ 1.34
SMPD3-203ENST00000563226 PLCH1Q4KWH8 1693 aa23.41■■□□□ 1.34
SMPD3-203ENST00000563226 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
SMPD3-203ENST00000563226 DEKP35659 375 aaKnown RBP23.4■■□□□ 1.34
SMPD3-203ENST00000563226 USP42Q9H9J4 1324 aaKnown RBP23.4■■□□□ 1.34
SMPD3-203ENST00000563226 WNK3Q9BYP7 1800 aa23.4■■□□□ 1.34
SMPD3-203ENST00000563226 SASH1O94885 1247 aa23.39■■□□□ 1.34
SMPD3-203ENST00000563226 UBE3BQ7Z3V4 1068 aa23.39■■□□□ 1.33
SMPD3-203ENST00000563226 CLASRPQ8N2M8 674 aaKnown RBP23.39■■□□□ 1.33
SMPD3-203ENST00000563226 PIGBQ92521 554 aa23.39■■□□□ 1.33
SMPD3-203ENST00000563226 ASAP1Q9ULH1 1129 aa23.39■■□□□ 1.33
SMPD3-203ENST00000563226 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 TJP1Q07157 1748 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 RABEP1Q15276 862 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 ERC1Q8IUD2 1116 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 SIL1Q9H173 461 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 IL25Q9H293 177 aa23.38■■□□□ 1.33
SMPD3-203ENST00000563226 K7ELQ4 463 aaPredicted RBP23.37■■□□□ 1.33
SMPD3-203ENST00000563226 DDIT3P35638 169 aa23.37■■□□□ 1.33
SMPD3-203ENST00000563226 CASP7P55210 303 aa23.37■■□□□ 1.33
SMPD3-203ENST00000563226 A0A087WZG4 1122 aa23.36■■□□□ 1.33
SMPD3-203ENST00000563226 G3BP1Q13283 466 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMPD3-203ENST00000563226 CHMP5Q9NZZ3 219 aa23.36■■□□□ 1.33
SMPD3-203ENST00000563226 TTC41PQ6P2S7 1318 aa23.36■■□□□ 1.33
SMPD3-203ENST00000563226 AACSQ86V21 672 aa23.35■■□□□ 1.33
SMPD3-203ENST00000563226 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
SMPD3-203ENST00000563226 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
SMPD3-203ENST00000563226 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
SMPD3-203ENST00000563226 COL15A1P39059 1388 aa23.34■■□□□ 1.33
SMPD3-203ENST00000563226 IFIT2P09913 472 aaKnown RBP23.34■■□□□ 1.33
SMPD3-203ENST00000563226 RFX5P48382 616 aaPredicted RBP23.34■■□□□ 1.33
SMPD3-203ENST00000563226 EAF2Q96CJ1 260 aaPredicted RBP23.34■■□□□ 1.33
SMPD3-203ENST00000563226 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
SMPD3-203ENST00000563226 ADAMTS2O95450 1211 aa23.33■■□□□ 1.33
SMPD3-203ENST00000563226 RABL6Q3YEC7 729 aaPredicted RBP23.33■■□□□ 1.33
SMPD3-203ENST00000563226 ANO2Q9NQ90 1003 aa23.33■■□□□ 1.33
SMPD3-203ENST00000563226 ECHDC1Q9NTX5 307 aa23.33■■□□□ 1.33
SMPD3-203ENST00000563226 FOXD4L1Q9NU39 408 aa23.33■■□□□ 1.33
SMPD3-203ENST00000563226 NRAPQ86VF7 1730 aa23.33■■□□□ 1.33
SMPD3-203ENST00000563226 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
SMPD3-203ENST00000563226 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
SMPD3-203ENST00000563226 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
SMPD3-203ENST00000563226 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
SMPD3-203ENST00000563226 CCDC8Q9H0W5 538 aaPredicted RBP23.31■■□□□ 1.32
SMPD3-203ENST00000563226 LRP6O75581 1613 aa23.31■■□□□ 1.32
SMPD3-203ENST00000563226 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
SMPD3-203ENST00000563226 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
SMPD3-203ENST00000563226 H7C1W4 665 aa23.3■■□□□ 1.32
SMPD3-203ENST00000563226 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
SMPD3-203ENST00000563226 BCL9O00512 1426 aa23.3■■□□□ 1.32
SMPD3-203ENST00000563226 CWC25Q9NXE8 425 aaPredicted RBP23.29■■□□□ 1.32
SMPD3-203ENST00000563226 EXOC5O00471 708 aa23.29■■□□□ 1.32
SMPD3-203ENST00000563226 GPATCH3Q96I76 525 aa23.29■■□□□ 1.32
SMPD3-203ENST00000563226 ZNF330Q9Y3S2 320 aaPredicted RBP23.29■■□□□ 1.32
SMPD3-203ENST00000563226 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
SMPD3-203ENST00000563226 FOXO4P98177 505 aa23.28■■□□□ 1.32
SMPD3-203ENST00000563226 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
SMPD3-203ENST00000563226 VSIG10Q8N0Z9 540 aa23.28■■□□□ 1.32
SMPD3-203ENST00000563226 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
SMPD3-203ENST00000563226 SGSM2O43147 1006 aa23.27■■□□□ 1.32
SMPD3-203ENST00000563226 HSP90AA1P07900 732 aaKnown RBP23.27■■□□□ 1.32
SMPD3-203ENST00000563226 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
SMPD3-203ENST00000563226 CCDC191Q8NCU4 936 aa23.25■■□□□ 1.31
SMPD3-203ENST00000563226 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
SMPD3-203ENST00000563226 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms