RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 POTECB2RU33 542 aa22.13■■□□□ 1.13
CMTM3-205ENST00000562707 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
CMTM3-205ENST00000562707 NBPF5PQ86XG9 351 aaPredicted RBP22.13■■□□□ 1.13
CMTM3-205ENST00000562707 PRPF40BQ6NWY9 871 aaKnown RBP22.12■■□□□ 1.13
CMTM3-205ENST00000562707 MCM10Q7L590 875 aa22.12■■□□□ 1.13
CMTM3-205ENST00000562707 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
CMTM3-205ENST00000562707 PRAMEF22A3QJZ6 481 aa22.1■■□□□ 1.13
CMTM3-205ENST00000562707 HTATSF1O43719 755 aaKnown RBP22.1■■□□□ 1.13
CMTM3-205ENST00000562707 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
CMTM3-205ENST00000562707 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-205ENST00000562707 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
CMTM3-205ENST00000562707 TPTE2Q6XPS3 522 aa22.09■■□□□ 1.13
CMTM3-205ENST00000562707 SCN7AQ01118 1682 aa22.08■■□□□ 1.13
CMTM3-205ENST00000562707 DDNO94850 711 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-205ENST00000562707 NPR1P16066 1061 aa22.07■■□□□ 1.12
CMTM3-205ENST00000562707 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
CMTM3-205ENST00000562707 CCDC93Q567U6 631 aa22.07■■□□□ 1.12
CMTM3-205ENST00000562707 NIP7Q9Y221 180 aaKnown RBP eCLIP22.07■■□□□ 1.12
CMTM3-205ENST00000562707 RGL2O15211 777 aa22.06■■□□□ 1.12
CMTM3-205ENST00000562707 TAF7Q15545 349 aaPredicted RBP22.06■■□□□ 1.12
CMTM3-205ENST00000562707 CHADLQ6NUI6 762 aa22.06■■□□□ 1.12
CMTM3-205ENST00000562707 SIPA1L3O60292 1781 aaPredicted RBP22.05■■□□□ 1.12
CMTM3-205ENST00000562707 NBPF26B4DH59 902 aa22.05■■□□□ 1.12
CMTM3-205ENST00000562707 NEFMP07197 916 aa22.05■■□□□ 1.12
CMTM3-205ENST00000562707 NBPF10Q6P3W6 841 aaKnown RBP22.05■■□□□ 1.12
CMTM3-205ENST00000562707 NBPF15Q8N660 670 aa22.05■■□□□ 1.12
CMTM3-205ENST00000562707 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
CMTM3-205ENST00000562707 FAM177BA6PVY3 158 aa22.04■■□□□ 1.12
CMTM3-205ENST00000562707 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
CMTM3-205ENST00000562707 C7orf43Q8WVR3 580 aa22.04■■□□□ 1.12
CMTM3-205ENST00000562707 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
CMTM3-205ENST00000562707 KLRG2A4D1S0 409 aaPredicted RBP22.03■■□□□ 1.12
CMTM3-205ENST00000562707 IQCA1LA6NCM1 817 aa22.03■■□□□ 1.12
CMTM3-205ENST00000562707 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
CMTM3-205ENST00000562707 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
CMTM3-205ENST00000562707 TNS4Q8IZW8 715 aa22.03■■□□□ 1.12
CMTM3-205ENST00000562707 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.12
CMTM3-205ENST00000562707 ALDH1B1P30837 517 aa22.01■■□□□ 1.11
CMTM3-205ENST00000562707 RTKN2Q8IZC4 609 aa22.01■■□□□ 1.11
CMTM3-205ENST00000562707 PNISRQ8TF01 805 aaKnown RBP22.01■■□□□ 1.11
CMTM3-205ENST00000562707 CREBZFQ9NS37 354 aa22.01■■□□□ 1.11
CMTM3-205ENST00000562707 MIS18AQ9NYP9 233 aa22.01■■□□□ 1.11
CMTM3-205ENST00000562707 COL11A2P13942 1736 aaPredicted RBP22■■□□□ 1.11
CMTM3-205ENST00000562707 POTEIP0CG38 1075 aa22■■□□□ 1.11
CMTM3-205ENST00000562707 POTEJP0CG39 1038 aa22■■□□□ 1.11
CMTM3-205ENST00000562707 HLFQ16534 295 aa22■■□□□ 1.11
CMTM3-205ENST00000562707 LDHDQ86WU2 507 aa21.99■■□□□ 1.11
CMTM3-205ENST00000562707 NGEFQ8N5V2 710 aa21.99■■□□□ 1.11
CMTM3-205ENST00000562707 L3MBTL3Q96JM7 780 aaPredicted RBP21.99■■□□□ 1.11
CMTM3-205ENST00000562707 ZNF277Q9NRM2 450 aaPredicted RBP21.99■■□□□ 1.11
CMTM3-205ENST00000562707 NYXQ9GZU5 481 aa21.98■■□□□ 1.11
CMTM3-205ENST00000562707 TAF1DQ9H5J8 278 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-205ENST00000562707 FER1L6Q2WGJ9 1857 aa21.98■■□□□ 1.11
CMTM3-205ENST00000562707 SLX4Q8IY92 1834 aa21.97■■□□□ 1.11
CMTM3-205ENST00000562707 CAPN15O75808 1086 aa21.97■■□□□ 1.11
CMTM3-205ENST00000562707 MKRN1Q9UHC7 482 aaKnown RBP21.97■■□□□ 1.11
CMTM3-205ENST00000562707 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
CMTM3-205ENST00000562707 OLFM4Q6UX06 510 aa21.96■■□□□ 1.11
CMTM3-205ENST00000562707 CCDC88AQ3V6T2 1871 aa21.96■■□□□ 1.11
CMTM3-205ENST00000562707 BCORQ6W2J9 1755 aa21.95■■□□□ 1.1
CMTM3-205ENST00000562707 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
CMTM3-205ENST00000562707 SYNE4Q8N205 404 aa21.95■■□□□ 1.1
CMTM3-205ENST00000562707 HACL1Q9UJ83 578 aa21.95■■□□□ 1.1
CMTM3-205ENST00000562707 RRP7AQ9Y3A4 280 aaKnown RBP21.95■■□□□ 1.1
CMTM3-205ENST00000562707 IARSP41252 1262 aaKnown RBP21.94■■□□□ 1.1
CMTM3-205ENST00000562707 EAPPQ56P03 285 aaPredicted RBP21.94■■□□□ 1.1
CMTM3-205ENST00000562707 CLEC11AQ9Y240 323 aa21.94■■□□□ 1.1
CMTM3-205ENST00000562707 MAP3K15Q6ZN16 1313 aa21.93■■□□□ 1.1
CMTM3-205ENST00000562707 ZNF541Q9H0D2 1346 aa21.93■■□□□ 1.1
CMTM3-205ENST00000562707 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
CMTM3-205ENST00000562707 PASKQ96RG2 1323 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 MYL6BP14649 208 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 EIF4A1P60842 406 aaKnown RBP21.92■■□□□ 1.1
CMTM3-205ENST00000562707 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 CC2D2BQ6DHV5 1058 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 PNMA8AQ86V59 439 aaPredicted RBP21.92■■□□□ 1.1
CMTM3-205ENST00000562707 NUTM1Q86Y26 1132 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
CMTM3-205ENST00000562707 DICER1Q9UPY3 1922 aaKnown RBP21.91■■□□□ 1.1
CMTM3-205ENST00000562707 FZD9O00144 591 aa21.91■■□□□ 1.1
CMTM3-205ENST00000562707 EPHX2P34913 555 aa21.91■■□□□ 1.1
CMTM3-205ENST00000562707 CRY2Q49AN0 593 aa21.91■■□□□ 1.1
CMTM3-205ENST00000562707 TTLL7Q6ZT98 887 aa21.91■■□□□ 1.1
CMTM3-205ENST00000562707 RPGRQ92834 1020 aaKnown RBP21.91■■□□□ 1.1
CMTM3-205ENST00000562707 PSMD1Q99460 953 aa21.91■■□□□ 1.1
CMTM3-205ENST00000562707 TMEM88BA6NKF7 163 aa21.9■■□□□ 1.1
CMTM3-205ENST00000562707 GPTP24298 496 aa21.9■■□□□ 1.1
CMTM3-205ENST00000562707 CNTNAP1P78357 1384 aa21.89■■□□□ 1.1
CMTM3-205ENST00000562707 MAPK8IP3Q9UPT6 1336 aa21.89■■□□□ 1.1
CMTM3-205ENST00000562707 ITGBL1O95965 494 aaPredicted RBP21.89■■□□□ 1.09
CMTM3-205ENST00000562707 GRIPAP1Q4V328 841 aa21.89■■□□□ 1.09
CMTM3-205ENST00000562707 GPC2Q8N158 579 aa21.89■■□□□ 1.09
CMTM3-205ENST00000562707 PLEKHF1Q96S99 279 aa21.89■■□□□ 1.09
CMTM3-205ENST00000562707 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.09
CMTM3-205ENST00000562707 EIF6P56537 245 aaKnown RBP21.88■■□□□ 1.09
CMTM3-205ENST00000562707 THUMPD2Q9BTF0 503 aaKnown RBP21.88■■□□□ 1.09
CMTM3-205ENST00000562707 ABCC12Q96J65 1359 aa21.87■■□□□ 1.09
CMTM3-205ENST00000562707 ARFGEF2Q9Y6D5 1785 aa21.87■■□□□ 1.09
CMTM3-205ENST00000562707 RNF123Q5XPI4 1314 aa21.87■■□□□ 1.09
CMTM3-205ENST00000562707 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms