RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 MYOM3Q5VTT5 1437 aa9.47□□□□□ -0.89
TCF4-213ENST00000562543 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
TCF4-213ENST00000562543 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
TCF4-213ENST00000562543 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
TCF4-213ENST00000562543 IFT172Q9UG01 1749 aa9.45□□□□□ -0.9
TCF4-213ENST00000562543 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
TCF4-213ENST00000562543 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
TCF4-213ENST00000562543 RNF19BQ6ZMZ0 732 aa9.45□□□□□ -0.9
TCF4-213ENST00000562543 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
TCF4-213ENST00000562543 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
TCF4-213ENST00000562543 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
TCF4-213ENST00000562543 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
TCF4-213ENST00000562543 THRAP3Q9Y2W1 955 aaKnown RBP9.44□□□□□ -0.9
TCF4-213ENST00000562543 KIAA0232Q92628 1395 aa9.44□□□□□ -0.9
TCF4-213ENST00000562543 WNK3Q9BYP7 1800 aa9.44□□□□□ -0.9
TCF4-213ENST00000562543 LMO7Q8WWI1 1683 aa9.43□□□□□ -0.9
TCF4-213ENST00000562543 BRICD5Q6PL45 260 aa9.43□□□□□ -0.9
TCF4-213ENST00000562543 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 PNPLA7Q6ZV29 1317 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 CD2BP2O95400 341 aaKnown RBP9.42□□□□□ -0.9
TCF4-213ENST00000562543 RPIAP49247 311 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 SMC1BQ8NDV3 1235 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 TOR4AQ9NXH8 423 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 PKD1L3Q7Z443 1732 aa9.42□□□□□ -0.9
TCF4-213ENST00000562543 CHRNA2Q15822 529 aa9.41□□□□□ -0.9
TCF4-213ENST00000562543 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
TCF4-213ENST00000562543 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
TCF4-213ENST00000562543 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
TCF4-213ENST00000562543 BRD4O60885 1362 aaPredicted RBP9.4□□□□□ -0.9
TCF4-213ENST00000562543 CUL9Q8IWT3 2517 aa9.4□□□□□ -0.9
TCF4-213ENST00000562543 LBX1P52954 281 aa9.4□□□□□ -0.9
TCF4-213ENST00000562543 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
TCF4-213ENST00000562543 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
TCF4-213ENST00000562543 KNDC1Q76NI1 1749 aa9.39□□□□□ -0.91
TCF4-213ENST00000562543 DLL1O00548 723 aa9.39□□□□□ -0.91
TCF4-213ENST00000562543 VIRMAQ69YN4 1812 aaKnown RBP9.38□□□□□ -0.91
TCF4-213ENST00000562543 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
TCF4-213ENST00000562543 HLA-CQ95604 372 aa9.38□□□□□ -0.91
TCF4-213ENST00000562543 AIDAQ96BJ3 306 aa9.38□□□□□ -0.91
TCF4-213ENST00000562543 GMPR2Q9P2T1 348 aaKnown RBP9.38□□□□□ -0.91
TCF4-213ENST00000562543 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 PIK3C2AO00443 1686 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
TCF4-213ENST00000562543 ZNF326Q5BKZ1 582 aaKnown RBP9.37□□□□□ -0.91
TCF4-213ENST00000562543 MARCH10Q8NA82 808 aaPredicted RBP9.37□□□□□ -0.91
TCF4-213ENST00000562543 KDM2AQ9Y2K7 1162 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
TCF4-213ENST00000562543 BTAF1O14981 1849 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 TRPM1Q7Z4N2 1603 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 DAPK1P53355 1430 aa9.37□□□□□ -0.91
TCF4-213ENST00000562543 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 ZBTB24O43167 697 aaPredicted RBP9.36□□□□□ -0.91
TCF4-213ENST00000562543 EVA1CP58658 441 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 DDB1Q16531 1140 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 ANKRD30AQ9BXX3 1397 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 PLEKHH1Q9ULM0 1364 aa9.36□□□□□ -0.91
TCF4-213ENST00000562543 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
TCF4-213ENST00000562543 AXIN1O15169 862 aa9.35□□□□□ -0.91
TCF4-213ENST00000562543 AVPP01185 164 aa9.35□□□□□ -0.91
TCF4-213ENST00000562543 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
TCF4-213ENST00000562543 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
TCF4-213ENST00000562543 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
TCF4-213ENST00000562543 CRB1P82279 1406 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 CD46P15529 392 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 LCE2AQ5TA79 106 aaPredicted RBP9.34□□□□□ -0.91
TCF4-213ENST00000562543 WAPLQ7Z5K2 1190 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 QRICH2Q9H0J4 1663 aa9.34□□□□□ -0.91
TCF4-213ENST00000562543 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
TCF4-213ENST00000562543 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 SMPD1P17405 629 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
TCF4-213ENST00000562543 TRIM32Q13049 653 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
TCF4-213ENST00000562543 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
TCF4-213ENST00000562543 J3QL48 77 aa9.31□□□□□ -0.92
TCF4-213ENST00000562543 ZC3H6P61129 1189 aaKnown RBP9.31□□□□□ -0.92
TCF4-213ENST00000562543 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
TCF4-213ENST00000562543 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
TCF4-213ENST00000562543 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
TCF4-213ENST00000562543 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 KDM4AO75164 1064 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 MMP16P51512 607 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 CCDC24Q8N4L8 307 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
TCF4-213ENST00000562543 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
TCF4-213ENST00000562543 ACIN1Q9UKV3 1341 aaKnown RBP9.3□□□□□ -0.92
TCF4-213ENST00000562543 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 KIF1BO60333 1816 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 CPDO75976 1380 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 GPRASP1Q5JY77 1395 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 WNT7AO00755 349 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 IRF6O14896 467 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 MAP2K5Q13163 448 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms