RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
NSMCE1-202ENST00000561960 SETDB2Q96T68 719 aa15.76■□□□□ 0.11
NSMCE1-202ENST00000561960 USP16Q9Y5T5 823 aa15.76■□□□□ 0.11
NSMCE1-202ENST00000561960 ZNF541Q9H0D2 1346 aa15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 ZNF277Q9NRM2 450 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 SCN4AP35499 1836 aa15.75■□□□□ 0.11
NSMCE1-202ENST00000561960 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 PRKAR2BP31323 418 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 ST5P78524 1137 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 MCM10Q7L590 875 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
NSMCE1-202ENST00000561960 FOXN1O15353 648 aa15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 SRGNP10124 158 aa15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 NUP98P52948 1817 aa15.73■□□□□ 0.11
NSMCE1-202ENST00000561960 NGEFQ8N5V2 710 aa15.72■□□□□ 0.11
NSMCE1-202ENST00000561960 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 CLEC11AQ9Y240 323 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
NSMCE1-202ENST00000561960 STYK1Q6J9G0 422 aa15.7■□□□□ 0.1
NSMCE1-202ENST00000561960 CNKSR1Q969H4 720 aa15.7■□□□□ 0.1
NSMCE1-202ENST00000561960 COL4A5P29400 1685 aa15.7■□□□□ 0.1
NSMCE1-202ENST00000561960 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 LTBP1Q14766 1721 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 FMR1Q06787 632 aaKnown RBP eCLIP15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 HLFQ16534 295 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 TAF1DQ9H5J8 278 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 ADAMTSL1Q8N6G6 1762 aa15.69■□□□□ 0.1
NSMCE1-202ENST00000561960 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 NBPF26B4DH59 902 aa15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 VEGFBP49765 207 aa15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 MAP1SQ66K74 1059 aaPredicted RBP15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 NBPF10Q6P3W6 841 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 NBPF15Q8N660 670 aa15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 LTBP3Q9NS15 1303 aa15.68■□□□□ 0.1
NSMCE1-202ENST00000561960 GRM1Q13255 1194 aa15.67■□□□□ 0.1
NSMCE1-202ENST00000561960 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
NSMCE1-202ENST00000561960 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
NSMCE1-202ENST00000561960 C7orf43Q8WVR3 580 aa15.67■□□□□ 0.1
NSMCE1-202ENST00000561960 PASKQ96RG2 1323 aa15.67■□□□□ 0.1
NSMCE1-202ENST00000561960 ABCC12Q96J65 1359 aa15.66■□□□□ 0.1
NSMCE1-202ENST00000561960 TAF1P21675 1872 aa15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 NPR1P16066 1061 aa15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 LDHDQ86WU2 507 aa15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 GJA3Q9Y6H8 435 aa15.65■□□□□ 0.1
NSMCE1-202ENST00000561960 EPHX2P34913 555 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 LBX1P52954 281 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 SYNE4Q8N205 404 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 TRPM7Q96QT4 1865 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 HACL1Q9UJ83 578 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.09
NSMCE1-202ENST00000561960 IQCA1LA6NCM1 817 aa15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 TMEM88BA6NKF7 163 aa15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 GPTP24298 496 aa15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 GTF2E1P29083 439 aaPredicted RBP15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 AIDAQ96BJ3 306 aa15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
NSMCE1-202ENST00000561960 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 ABT1Q9ULW3 272 aaKnown RBP15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 LAMB2P55268 1798 aa15.62■□□□□ 0.09
NSMCE1-202ENST00000561960 MYL6BP14649 208 aa15.61■□□□□ 0.09
NSMCE1-202ENST00000561960 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
NSMCE1-202ENST00000561960 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
NSMCE1-202ENST00000561960 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
NSMCE1-202ENST00000561960 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
NSMCE1-202ENST00000561960 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
NSMCE1-202ENST00000561960 C3orf67Q6ZVT6 689 aa15.6■□□□□ 0.09
NSMCE1-202ENST00000561960 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
NSMCE1-202ENST00000561960 ZBTB3Q9H5J0 574 aa15.6■□□□□ 0.09
NSMCE1-202ENST00000561960 TRAF5O00463 557 aa15.59■□□□□ 0.09
NSMCE1-202ENST00000561960 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
NSMCE1-202ENST00000561960 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms