RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZNF142P52746 1687 aaPredicted RBP5.39□□□□□ -1.55
SPG11-225ENST00000561391 SPATA31A6Q5VVP1 1343 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 RGS12O14924 1447 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 POLR1AO95602 1720 aaPredicted RBP5.38□□□□□ -1.55
SPG11-225ENST00000561391 PTGIRP43119 386 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 CCDC125Q86Z20 511 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 TRIM22Q8IYM9 498 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 GMCL1Q96IK5 515 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 GDPD2Q9HCC8 539 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 SLAIN2Q9P270 581 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 NSFL1CQ9UNZ2 370 aaKnown RBP5.38□□□□□ -1.55
SPG11-225ENST00000561391 ZNF518AQ6AHZ1 1483 aa5.38□□□□□ -1.55
SPG11-225ENST00000561391 ROBO1Q9Y6N7 1651 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 H7C1W4 665 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 APBB1O00213 710 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 MX2P20592 715 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 ABL2P42684 1182 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 BAG6P46379 1132 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 PTK2Q05397 1052 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 NR6A1Q15406 480 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 DEFB132Q7Z7B7 95 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 PROSER2Q86WR7 435 aaPredicted RBP5.37□□□□□ -1.55
SPG11-225ENST00000561391 EPS8L1Q8TE68 723 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 NGLY1Q96IV0 654 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 C8orf37Q96NL8 207 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 PRM3Q9NNZ6 103 aa5.37□□□□□ -1.55
SPG11-225ENST00000561391 ZC3H4Q9UPT8 1303 aaKnown RBP5.37□□□□□ -1.55
SPG11-225ENST00000561391 CLTCQ00610 1675 aaKnown RBP5.37□□□□□ -1.55
SPG11-225ENST00000561391 C1QTNF8P60827 252 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 ADAM32Q8TC27 787 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 GTPBP3Q969Y2 492 aaKnown RBP5.36□□□□□ -1.55
SPG11-225ENST00000561391 ACDQ96AP0 544 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 GAS2L1Q99501 681 aaPredicted RBP5.36□□□□□ -1.55
SPG11-225ENST00000561391 TBC1D2BQ9UPU7 963 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 COG6Q9Y2V7 657 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 ABCA6Q8N139 1617 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 RAPGEF6Q8TEU7 1601 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 MROH2AA6NES4 1674 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 PHLPP1O60346 1717 aa5.36□□□□□ -1.55
SPG11-225ENST00000561391 REREQ9P2R6 1566 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 ABCC1P33527 1531 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 MED14O60244 1454 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 NUP153P49790 1475 aaKnown RBP5.35□□□□□ -1.55
SPG11-225ENST00000561391 TMEM94Q12767 1356 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 TNRQ92752 1358 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 ERVH48-1M5A8F1 160 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 FURINP09958 794 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 DZIP3Q86Y13 1208 aaKnown RBP5.35□□□□□ -1.55
SPG11-225ENST00000561391 GJD4Q96KN9 370 aaPredicted RBP5.35□□□□□ -1.55
SPG11-225ENST00000561391 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 RRAGCQ9HB90 399 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 MKL2Q9ULH7 1088 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 NDUFB9Q9Y6M9 179 aa5.35□□□□□ -1.55
SPG11-225ENST00000561391 CDK13Q14004 1512 aaKnown RBP5.34□□□□□ -1.55
SPG11-225ENST00000561391 MLH3Q9UHC1 1453 aa5.34□□□□□ -1.55
SPG11-225ENST00000561391 MEN1O00255 615 aa5.34□□□□□ -1.55
SPG11-225ENST00000561391 ADD1P35611 737 aaKnown RBP5.34□□□□□ -1.55
SPG11-225ENST00000561391 DBN1Q16643 649 aa5.34□□□□□ -1.55
SPG11-225ENST00000561391 TRIM34Q9BYJ4 488 aa5.34□□□□□ -1.55
SPG11-225ENST00000561391 CYLDQ9NQC7 956 aa5.34□□□□□ -1.55
SPG11-225ENST00000561391 XIRP1Q702N8 1843 aaKnown RBP5.34□□□□□ -1.55
SPG11-225ENST00000561391 KRBA1A5PL33 1030 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 A6NJR5 290 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 OIP5O43482 229 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 LILRA1O75019 489 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 RNF144AP50876 292 aaPredicted RBP5.33□□□□□ -1.56
SPG11-225ENST00000561391 SLC27A3Q5K4L6 730 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 ALYREFQ86V81 257 aaKnown RBP5.33□□□□□ -1.56
SPG11-225ENST00000561391 TXNDC2Q86VQ3 553 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 WWC1Q8IX03 1113 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 PNMA1Q8ND90 353 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 OXCT2Q9BYC2 517 aaPredicted RBP5.33□□□□□ -1.56
SPG11-225ENST00000561391 LRRC4BQ9NT99 713 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 ZNF777Q9ULD5 760 aaPredicted RBP5.33□□□□□ -1.56
SPG11-225ENST00000561391 ZNF330Q9Y3S2 320 aaPredicted RBP5.33□□□□□ -1.56
SPG11-225ENST00000561391 GPSM3Q9Y4H4 160 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 IQGAP1P46940 1657 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 CTTNBP2Q8WZ74 1663 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 LRP5O75197 1615 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 SYNMO15061 1565 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 KDM5CP41229 1560 aa5.33□□□□□ -1.56
SPG11-225ENST00000561391 ITSN2Q9NZM3 1697 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 ATP5J2-PTCD1G3V325 749 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 TRAK2O60296 914 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 MAP2K3P46734 347 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 SNRPNP63162 240 aaKnown RBP5.32□□□□□ -1.56
SPG11-225ENST00000561391 SF3B2Q13435 895 aaKnown RBP5.32□□□□□ -1.56
SPG11-225ENST00000561391 GRIN2CQ14957 1233 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 DYRK1BQ9Y463 629 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 ARHGAP5Q13017 1502 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 FAM135AQ9P2D6 1515 aa5.32□□□□□ -1.56
SPG11-225ENST00000561391 AMPD1P23109 780 aa5.31□□□□□ -1.56
SPG11-225ENST00000561391 LTKP29376 864 aa5.31□□□□□ -1.56
SPG11-225ENST00000561391 R3HDM1Q15032 1099 aaKnown RBP5.31□□□□□ -1.56
SPG11-225ENST00000561391 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
SPG11-225ENST00000561391 KDF1Q8NAX2 398 aaPredicted RBP5.31□□□□□ -1.56
SPG11-225ENST00000561391 OCSTAMPQ9BR26 566 aa5.31□□□□□ -1.56
SPG11-225ENST00000561391 NUCKS1Q9H1E3 243 aaKnown RBP5.31□□□□□ -1.56
SPG11-225ENST00000561391 USP21Q9UK80 565 aa5.31□□□□□ -1.56
SPG11-225ENST00000561391 FGD6Q6ZV73 1430 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms