RNA–Protein interactions for RNA: ENST00000561133.5

SEMA6D-217, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-217ENST00000561133 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
SEMA6D-217ENST00000561133 ZNF790Q6PG37 636 aa8.72□□□□□ -1.01
SEMA6D-217ENST00000561133 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
SEMA6D-217ENST00000561133 AIDAQ96BJ3 306 aa8.72□□□□□ -1.01
SEMA6D-217ENST00000561133 ZNF496Q96IT1 587 aaPredicted RBP8.72□□□□□ -1.01
SEMA6D-217ENST00000561133 COL11A2P13942 1736 aaPredicted RBP8.71□□□□□ -1.01
SEMA6D-217ENST00000561133 CACNA1SQ13698 1873 aa8.71□□□□□ -1.01
SEMA6D-217ENST00000561133 ANKRD31Q8N7Z5 1873 aa8.71□□□□□ -1.01
SEMA6D-217ENST00000561133 POTECB2RU33 542 aa8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 DDNO94850 711 aaPredicted RBP8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 STYK1Q6J9G0 422 aa8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 NBPF5PQ86XG9 351 aaPredicted RBP8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 DZIP3Q86Y13 1208 aaKnown RBP8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 LTBP3Q9NS15 1303 aa8.71□□□□□ -1.02
SEMA6D-217ENST00000561133 FER1L6Q2WGJ9 1857 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 A1BGP04217 495 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 LDHDQ86WU2 507 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 MASTLQ96GX5 879 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 DICER1Q9UPY3 1922 aaKnown RBP8.7□□□□□ -1.02
SEMA6D-217ENST00000561133 POTEIP0CG38 1075 aa8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 POTEJP0CG39 1038 aa8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 SRGNP10124 158 aa8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 IL17REQ8NFR9 667 aa8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
SEMA6D-217ENST00000561133 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 CAMTA2O94983 1202 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 NPR1P16066 1061 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 RTF1Q92541 710 aaKnown RBP8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 CFAP53Q96M91 514 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 CNTNAP1P78357 1384 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 ARFGEF2Q9Y6D5 1785 aa8.68□□□□□ -1.02
SEMA6D-217ENST00000561133 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 FOXN1O15353 648 aa8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 SIPA1L3O60292 1781 aaPredicted RBP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 CTCFP49711 727 aaPredicted RBP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 CLEC4GQ6UXB4 293 aa8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 TPTE2Q6XPS3 522 aa8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 SLX4Q8IY92 1834 aa8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 TAF1DQ9H5J8 278 aaPredicted RBP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 NIP7Q9Y221 180 aaKnown RBP eCLIP8.67□□□□□ -1.02
SEMA6D-217ENST00000561133 SCN4AP35499 1836 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 SNRPA1P09661 255 aaKnown RBP8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 EPHX2P34913 555 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 PNMA8AQ86V59 439 aaPredicted RBP8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 RTKN2Q8IZC4 609 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 JDP2Q8WYK2 163 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 PRDM10Q9NQV6 1147 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 ZNF277Q9NRM2 450 aaPredicted RBP8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 ABT1Q9ULW3 272 aaKnown RBP8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 NUDCQ9Y266 331 aa8.66□□□□□ -1.02
SEMA6D-217ENST00000561133 COL3A1P02461 1466 aaPredicted RBP8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 CEMIPQ8WUJ3 1361 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 ZNF541Q9H0D2 1346 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 KCNQ3O43525 872 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 VEGFBP49765 207 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 PAXIP1Q6ZW49 1069 aaPredicted RBP8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 USP16Q9Y5T5 823 aa8.65□□□□□ -1.02
SEMA6D-217ENST00000561133 PRAMEF22A3QJZ6 481 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 IARSP41252 1262 aaKnown RBP8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 LBX1P52954 281 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 EIF6P56537 245 aaKnown RBP8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 DEFB115Q30KQ5 88 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 MCM10Q7L590 875 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 PHACTR3Q96KR7 559 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 GJA3Q9Y6H8 435 aa8.64□□□□□ -1.03
SEMA6D-217ENST00000561133 NEFMP07197 916 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 U2AF1L5P0DN76 240 aaPredicted RBP8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 U2AF1Q01081 240 aaKnown RBP eCLIP8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 MAP2K1Q02750 393 aaPredicted RBP8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 GRM1Q13255 1194 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 OLFM4Q6UX06 510 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 GPC2Q8N158 579 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 SYNE4Q8N205 404 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
SEMA6D-217ENST00000561133 NYXQ9GZU5 481 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms