RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
WHAMM-202ENST00000560964 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
WHAMM-202ENST00000560964 PLVAPQ9BX97 442 aa9.4□□□□□ -0.9
WHAMM-202ENST00000560964 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
WHAMM-202ENST00000560964 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
WHAMM-202ENST00000560964 CHRNA4P43681 627 aa9.39□□□□□ -0.91
WHAMM-202ENST00000560964 FLIIQ13045 1269 aa9.39□□□□□ -0.91
WHAMM-202ENST00000560964 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
WHAMM-202ENST00000560964 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
WHAMM-202ENST00000560964 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 XP32Q5T750 250 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 C1orf53Q5VUE5 145 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
WHAMM-202ENST00000560964 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
WHAMM-202ENST00000560964 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
WHAMM-202ENST00000560964 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
WHAMM-202ENST00000560964 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
WHAMM-202ENST00000560964 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 M0R2N6 131 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
WHAMM-202ENST00000560964 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
WHAMM-202ENST00000560964 HIRAP54198 1017 aaPredicted RBP9.36□□□□□ -0.91
WHAMM-202ENST00000560964 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 MDFIQ99750 246 aa9.36□□□□□ -0.91
WHAMM-202ENST00000560964 LARGE2Q8N3Y3 721 aa9.35□□□□□ -0.91
WHAMM-202ENST00000560964 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
WHAMM-202ENST00000560964 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
WHAMM-202ENST00000560964 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
WHAMM-202ENST00000560964 ATP9BO43861 1147 aa9.34□□□□□ -0.91
WHAMM-202ENST00000560964 GATA4P43694 442 aa9.34□□□□□ -0.91
WHAMM-202ENST00000560964 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
WHAMM-202ENST00000560964 PRDM6Q9NQX0 595 aa9.34□□□□□ -0.91
WHAMM-202ENST00000560964 CLDN10P78369 228 aa9.33□□□□□ -0.92
WHAMM-202ENST00000560964 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
WHAMM-202ENST00000560964 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
WHAMM-202ENST00000560964 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
WHAMM-202ENST00000560964 TSPAN10Q9H1Z9 355 aaPredicted RBP9.33□□□□□ -0.92
WHAMM-202ENST00000560964 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
WHAMM-202ENST00000560964 POM121CA8CG34 1229 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 SLC30A3Q99726 388 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
WHAMM-202ENST00000560964 M0R082 166 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 APBA3O96018 575 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 KCNQ4P56696 695 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 DOC2BQ14184 412 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 HIF1AQ16665 826 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 ZNF417Q8TAU3 575 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 ZNF587Q96SQ5 575 aaPredicted RBP9.31□□□□□ -0.92
WHAMM-202ENST00000560964 PHACTR1Q9C0D0 580 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
WHAMM-202ENST00000560964 HCN4Q9Y3Q4 1203 aa9.31□□□□□ -0.92
WHAMM-202ENST00000560964 SIX5Q8N196 739 aa9.3□□□□□ -0.92
WHAMM-202ENST00000560964 Q8N3U1 123 aa9.3□□□□□ -0.92
WHAMM-202ENST00000560964 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
WHAMM-202ENST00000560964 KCNH4Q9UQ05 1017 aa9.3□□□□□ -0.92
WHAMM-202ENST00000560964 SFI1A8K8P3 1242 aa9.29□□□□□ -0.92
WHAMM-202ENST00000560964 PPP1R12BO60237 982 aaPredicted RBP9.29□□□□□ -0.92
WHAMM-202ENST00000560964 ADH7P40394 386 aa9.29□□□□□ -0.92
WHAMM-202ENST00000560964 NACC1Q96RE7 527 aa9.29□□□□□ -0.92
WHAMM-202ENST00000560964 SEMA6BQ9H3T3 888 aa9.29□□□□□ -0.92
WHAMM-202ENST00000560964 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
WHAMM-202ENST00000560964 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
WHAMM-202ENST00000560964 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
WHAMM-202ENST00000560964 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
WHAMM-202ENST00000560964 HSH2DQ96JZ2 352 aa9.28□□□□□ -0.92
WHAMM-202ENST00000560964 SUSD3Q96L08 255 aa9.28□□□□□ -0.92
WHAMM-202ENST00000560964 TYRO3Q06418 890 aa9.27□□□□□ -0.93
WHAMM-202ENST00000560964 TSEN2Q8NCE0 465 aaKnown RBP9.27□□□□□ -0.93
WHAMM-202ENST00000560964 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
WHAMM-202ENST00000560964 STARD13Q9Y3M8 1113 aa9.27□□□□□ -0.93
WHAMM-202ENST00000560964 ALBP02768 609 aa9.26□□□□□ -0.93
WHAMM-202ENST00000560964 ZNF594Q96JF6 807 aaPredicted RBP9.26□□□□□ -0.93
WHAMM-202ENST00000560964 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
WHAMM-202ENST00000560964 COL9A3Q14050 684 aaPredicted RBP9.25□□□□□ -0.93
WHAMM-202ENST00000560964 RAB44Q7Z6P3 723 aaPredicted RBP9.25□□□□□ -0.93
WHAMM-202ENST00000560964 ALDH16A1Q8IZ83 802 aa9.25□□□□□ -0.93
WHAMM-202ENST00000560964 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
WHAMM-202ENST00000560964 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
WHAMM-202ENST00000560964 SEC13P55735 322 aa9.24□□□□□ -0.93
WHAMM-202ENST00000560964 BHMTQ93088 406 aa9.24□□□□□ -0.93
WHAMM-202ENST00000560964 C2orf49Q9BVC5 232 aaPredicted RBP9.24□□□□□ -0.93
WHAMM-202ENST00000560964 C21orf2O43822 256 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 LILRB5O75023 590 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 DKK1O94907 266 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 NID1P14543 1247 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 RASA1P20936 1047 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 C20orf204Q6ZNR8 217 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
WHAMM-202ENST00000560964 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
WHAMM-202ENST00000560964 SCG3Q8WXD2 468 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms