RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 RTL1A6NKG5 1358 aa11.71□□□□□ -0.54
TRPM1-212ENST00000560801 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.54
TRPM1-212ENST00000560801 BECN1Q14457 450 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
TRPM1-212ENST00000560801 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRPM1-212ENST00000560801 KSR2Q6VAB6 950 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 CEP152O94986 1710 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 AACSQ86V21 672 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 BAG3O95817 575 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 RNF181Q9P0P0 153 aa11.7□□□□□ -0.54
TRPM1-212ENST00000560801 ABT1Q9ULW3 272 aaKnown RBP11.7□□□□□ -0.54
TRPM1-212ENST00000560801 PANK1Q8TE04 598 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 ZKSCAN1P17029 563 aaPredicted RBP11.69□□□□□ -0.54
TRPM1-212ENST00000560801 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 SART3Q15020 963 aaKnown RBP11.69□□□□□ -0.54
TRPM1-212ENST00000560801 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 ZNF287Q9HBT7 754 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
TRPM1-212ENST00000560801 LRRFIP2Q9Y608 721 aaKnown RBP11.69□□□□□ -0.54
TRPM1-212ENST00000560801 ADRA2BP18089 450 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 SULF1Q8IWU6 871 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 ZBTB1Q9Y2K1 713 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
TRPM1-212ENST00000560801 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
TRPM1-212ENST00000560801 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 TDO2P48775 406 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 LMBR1LQ6UX01 489 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
TRPM1-212ENST00000560801 BCORL1Q5H9F3 1711 aa11.68□□□□□ -0.54
TRPM1-212ENST00000560801 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
TRPM1-212ENST00000560801 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-212ENST00000560801 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-212ENST00000560801 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 ZBED9Q6R2W3 1325 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-212ENST00000560801 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
TRPM1-212ENST00000560801 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 ATP7BP35670 1465 aa11.67□□□□□ -0.54
TRPM1-212ENST00000560801 TNIP1Q15025 636 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
TRPM1-212ENST00000560801 GSTO1P78417 241 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 FNBP4Q8N3X1 1017 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-212ENST00000560801 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 GOLGA6L4A6NEF3 574 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 CPLX1O14810 134 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 YY1P25490 414 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 PRKG1Q13976 671 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-212ENST00000560801 SSFA2P28290 1259 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 LINS1Q8NG48 757 aa11.66□□□□□ -0.54
TRPM1-212ENST00000560801 SPATA31D1Q6ZQQ2 1576 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 RSPH6AQ9H0K4 717 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 KIF3AQ9Y496 699 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 KDM2BQ8NHM5 1336 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 BCAR3O75815 825 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-212ENST00000560801 MKNK2Q9HBH9 465 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 MST1RQ04912 1400 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 IQGAP3Q86VI3 1631 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 KIF24Q5T7B8 1368 aa11.65□□□□□ -0.54
TRPM1-212ENST00000560801 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.55
TRPM1-212ENST00000560801 HOOK2Q96ED9 719 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 ZC3H13Q5T200 1668 aaKnown RBP11.64□□□□□ -0.55
TRPM1-212ENST00000560801 PDE8AO60658 829 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
TRPM1-212ENST00000560801 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 USP16Q9Y5T5 823 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 GRM8O00222 908 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 CYP27B1O15528 508 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 NOL8Q76FK4 1167 aaKnown RBP11.64□□□□□ -0.55
TRPM1-212ENST00000560801 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
TRPM1-212ENST00000560801 TULP4Q9NRJ4 1543 aa11.63□□□□□ -0.55
TRPM1-212ENST00000560801 SOCS7O14512 581 aa11.63□□□□□ -0.55
TRPM1-212ENST00000560801 ALDH1L1O75891 902 aa11.63□□□□□ -0.55
TRPM1-212ENST00000560801 RTKN2Q8IZC4 609 aa11.63□□□□□ -0.55
TRPM1-212ENST00000560801 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
TRPM1-212ENST00000560801 PTPRUQ92729 1446 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms