RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 PRAMEF22A3QJZ6 481 aa24.49■■□□□ 1.51
TPM1-224ENST00000560615 NFKBIEO00221 500 aa24.49■■□□□ 1.51
TPM1-224ENST00000560615 SRGNP10124 158 aa24.49■■□□□ 1.51
TPM1-224ENST00000560615 ZNF219Q9P2Y4 722 aaPredicted RBP24.49■■□□□ 1.51
TPM1-224ENST00000560615 ERFEQ4G0M1 354 aa24.48■■□□□ 1.51
TPM1-224ENST00000560615 TAOK3Q9H2K8 898 aa24.48■■□□□ 1.51
TPM1-224ENST00000560615 NIP7Q9Y221 180 aaKnown RBP eCLIP24.48■■□□□ 1.51
TPM1-224ENST00000560615 DLEC1Q9Y238 1755 aa24.48■■□□□ 1.51
TPM1-224ENST00000560615 GTF2E1P29083 439 aaPredicted RBP24.47■■□□□ 1.51
TPM1-224ENST00000560615 LTBP3Q9NS15 1303 aa24.46■■□□□ 1.51
TPM1-224ENST00000560615 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
TPM1-224ENST00000560615 NPR1P16066 1061 aa24.45■■□□□ 1.5
TPM1-224ENST00000560615 IFFO2Q5TF58 517 aa24.45■■□□□ 1.5
TPM1-224ENST00000560615 PRPF40BQ6NWY9 871 aaKnown RBP24.45■■□□□ 1.5
TPM1-224ENST00000560615 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.5
TPM1-224ENST00000560615 TNRC6CQ9HCJ0 1690 aaKnown RBP24.45■■□□□ 1.5
TPM1-224ENST00000560615 NBPF26B4DH59 902 aa24.44■■□□□ 1.5
TPM1-224ENST00000560615 NBPF10Q6P3W6 841 aaKnown RBP24.44■■□□□ 1.5
TPM1-224ENST00000560615 NBPF15Q8N660 670 aa24.44■■□□□ 1.5
TPM1-224ENST00000560615 CEP350Q5VT06 3117 aa24.44■■□□□ 1.5
TPM1-224ENST00000560615 SBF1O95248 1867 aa24.43■■□□□ 1.5
TPM1-224ENST00000560615 PRELPP51888 382 aa24.43■■□□□ 1.5
TPM1-224ENST00000560615 DNAJC5GQ8N7S2 189 aa24.43■■□□□ 1.5
TPM1-224ENST00000560615 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
TPM1-224ENST00000560615 RALBP1Q15311 655 aa24.42■■□□□ 1.5
TPM1-224ENST00000560615 KIF6Q6ZMV9 814 aa24.42■■□□□ 1.5
TPM1-224ENST00000560615 NYXQ9GZU5 481 aa24.42■■□□□ 1.5
TPM1-224ENST00000560615 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
TPM1-224ENST00000560615 ALDH1B1P30837 517 aa24.41■■□□□ 1.5
TPM1-224ENST00000560615 CCDC93Q567U6 631 aa24.41■■□□□ 1.5
TPM1-224ENST00000560615 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
TPM1-224ENST00000560615 KLRG2A4D1S0 409 aaPredicted RBP24.39■■□□□ 1.49
TPM1-224ENST00000560615 FAM177BA6PVY3 158 aa24.39■■□□□ 1.49
TPM1-224ENST00000560615 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
TPM1-224ENST00000560615 KLRG1Q96E93 195 aa24.39■■□□□ 1.49
TPM1-224ENST00000560615 BCORQ6W2J9 1755 aa24.39■■□□□ 1.49
TPM1-224ENST00000560615 LMOD3Q0VAK6 560 aa24.38■■□□□ 1.49
TPM1-224ENST00000560615 RTKN2Q8IZC4 609 aa24.38■■□□□ 1.49
TPM1-224ENST00000560615 RRP7AQ9Y3A4 280 aaKnown RBP24.38■■□□□ 1.49
TPM1-224ENST00000560615 ANKRD31Q8N7Z5 1873 aa24.38■■□□□ 1.49
TPM1-224ENST00000560615 HLFQ16534 295 aa24.37■■□□□ 1.49
TPM1-224ENST00000560615 ERBB4Q15303 1308 aa24.36■■□□□ 1.49
TPM1-224ENST00000560615 MAP3K15Q6ZN16 1313 aa24.36■■□□□ 1.49
TPM1-224ENST00000560615 MYL6BP14649 208 aa24.35■■□□□ 1.49
TPM1-224ENST00000560615 BABAM1Q9NWV8 329 aa24.35■■□□□ 1.49
TPM1-224ENST00000560615 TSPYL4Q9UJ04 414 aa24.35■■□□□ 1.49
TPM1-224ENST00000560615 IQCA1LA6NCM1 817 aa24.34■■□□□ 1.49
TPM1-224ENST00000560615 RIPK4P57078 832 aa24.34■■□□□ 1.49
TPM1-224ENST00000560615 FKBP4Q02790 459 aaKnown RBP eCLIP24.34■■□□□ 1.49
TPM1-224ENST00000560615 C7orf43Q8WVR3 580 aa24.34■■□□□ 1.49
TPM1-224ENST00000560615 THUMPD2Q9BTF0 503 aaKnown RBP24.33■■□□□ 1.49
TPM1-224ENST00000560615 COL11A2P13942 1736 aaPredicted RBP24.32■■□□□ 1.48
TPM1-224ENST00000560615 WDR90Q96KV7 1748 aa24.32■■□□□ 1.48
TPM1-224ENST00000560615 HTRA3P83110 453 aa24.32■■□□□ 1.48
TPM1-224ENST00000560615 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
TPM1-224ENST00000560615 DDNO94850 711 aaPredicted RBP24.31■■□□□ 1.48
TPM1-224ENST00000560615 GRIPAP1Q4V328 841 aa24.31■■□□□ 1.48
TPM1-224ENST00000560615 CC2D2BQ6DHV5 1058 aa24.31■■□□□ 1.48
TPM1-224ENST00000560615 JMYQ8N9B5 988 aa24.31■■□□□ 1.48
TPM1-224ENST00000560615 RPGRQ92834 1020 aaKnown RBP24.31■■□□□ 1.48
TPM1-224ENST00000560615 POTECB2RU33 542 aa24.3■■□□□ 1.48
TPM1-224ENST00000560615 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
TPM1-224ENST00000560615 FER1L6Q2WGJ9 1857 aa24.3■■□□□ 1.48
TPM1-224ENST00000560615 CHADLQ6NUI6 762 aa24.29■■□□□ 1.48
TPM1-224ENST00000560615 TTLL7Q6ZT98 887 aa24.29■■□□□ 1.48
TPM1-224ENST00000560615 TMX4Q9H1E5 349 aaPredicted RBP24.29■■□□□ 1.48
TPM1-224ENST00000560615 ZBTB3Q9H5J0 574 aa24.29■■□□□ 1.48
TPM1-224ENST00000560615 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
TPM1-224ENST00000560615 IBTKQ9P2D0 1353 aaPredicted RBP24.29■■□□□ 1.48
TPM1-224ENST00000560615 SLX4Q8IY92 1834 aa24.28■■□□□ 1.48
TPM1-224ENST00000560615 CRY2Q49AN0 593 aa24.28■■□□□ 1.48
TPM1-224ENST00000560615 PARP10Q53GL7 1025 aa24.28■■□□□ 1.48
TPM1-224ENST00000560615 GIGYF2Q6Y7W6 1299 aaKnown RBP24.28■■□□□ 1.48
TPM1-224ENST00000560615 NUTM1Q86Y26 1132 aa24.28■■□□□ 1.48
TPM1-224ENST00000560615 EIF2S2P20042 333 aaKnown RBP24.27■■□□□ 1.48
TPM1-224ENST00000560615 GPTP24298 496 aa24.27■■□□□ 1.48
TPM1-224ENST00000560615 JDP2Q8WYK2 163 aa24.27■■□□□ 1.48
TPM1-224ENST00000560615 RBM17Q96I25 401 aaKnown RBP24.27■■□□□ 1.48
TPM1-224ENST00000560615 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
TPM1-224ENST00000560615 MYBBP1AQ9BQG0 1328 aaKnown RBP24.27■■□□□ 1.48
TPM1-224ENST00000560615 IARSP41252 1262 aaKnown RBP24.26■■□□□ 1.47
TPM1-224ENST00000560615 TMPOP42166 694 aaKnown RBP24.26■■□□□ 1.47
TPM1-224ENST00000560615 L3MBTL3Q96JM7 780 aaPredicted RBP24.26■■□□□ 1.47
TPM1-224ENST00000560615 KDM3BQ7LBC6 1761 aa24.26■■□□□ 1.47
TPM1-224ENST00000560615 CCDC88AQ3V6T2 1871 aa24.26■■□□□ 1.47
TPM1-224ENST00000560615 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
TPM1-224ENST00000560615 WDR43Q15061 677 aaKnown RBP eCLIP24.25■■□□□ 1.47
TPM1-224ENST00000560615 ZNF34Q8IZ26 560 aa24.25■■□□□ 1.47
TPM1-224ENST00000560615 SYNE4Q8N205 404 aa24.25■■□□□ 1.47
TPM1-224ENST00000560615 PSMD1Q99460 953 aa24.25■■□□□ 1.47
TPM1-224ENST00000560615 DDX10Q13206 875 aaKnown RBP24.24■■□□□ 1.47
TPM1-224ENST00000560615 HSP90AB3PQ58FF7 597 aa24.24■■□□□ 1.47
TPM1-224ENST00000560615 SUSD4Q5VX71 490 aa24.24■■□□□ 1.47
TPM1-224ENST00000560615 HOXA10P31260 410 aaPredicted RBP24.23■■□□□ 1.47
TPM1-224ENST00000560615 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
TPM1-224ENST00000560615 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
TPM1-224ENST00000560615 CRAMP1Q96RY5 1269 aa24.23■■□□□ 1.47
TPM1-224ENST00000560615 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
TPM1-224ENST00000560615 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
TPM1-224ENST00000560615 DICER1Q9UPY3 1922 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms