RNA–Protein interactions for RNA: ENST00000560396.5

IDH3A-218, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-218ENST00000560396 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
IDH3A-218ENST00000560396 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
IDH3A-218ENST00000560396 PRELPP51888 382 aa18.43■□□□□ 0.54
IDH3A-218ENST00000560396 NBPF5PQ86XG9 351 aaPredicted RBP18.43■□□□□ 0.54
IDH3A-218ENST00000560396 WDR90Q96KV7 1748 aa18.43■□□□□ 0.54
IDH3A-218ENST00000560396 RGL2O15211 777 aa18.42■□□□□ 0.54
IDH3A-218ENST00000560396 SRGNP10124 158 aa18.42■□□□□ 0.54
IDH3A-218ENST00000560396 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
IDH3A-218ENST00000560396 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
IDH3A-218ENST00000560396 ANKRD31Q8N7Z5 1873 aa18.41■□□□□ 0.54
IDH3A-218ENST00000560396 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
IDH3A-218ENST00000560396 TAOK3Q9H2K8 898 aa18.41■□□□□ 0.54
IDH3A-218ENST00000560396 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
IDH3A-218ENST00000560396 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
IDH3A-218ENST00000560396 HTRA3P83110 453 aa18.4■□□□□ 0.54
IDH3A-218ENST00000560396 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
IDH3A-218ENST00000560396 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
IDH3A-218ENST00000560396 PRPF40BQ6NWY9 871 aaKnown RBP18.39■□□□□ 0.53
IDH3A-218ENST00000560396 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
IDH3A-218ENST00000560396 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
IDH3A-218ENST00000560396 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
IDH3A-218ENST00000560396 NPR1P16066 1061 aa18.37■□□□□ 0.53
IDH3A-218ENST00000560396 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
IDH3A-218ENST00000560396 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
IDH3A-218ENST00000560396 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
IDH3A-218ENST00000560396 NBPF26B4DH59 902 aa18.36■□□□□ 0.53
IDH3A-218ENST00000560396 NBPF10Q6P3W6 841 aaKnown RBP18.36■□□□□ 0.53
IDH3A-218ENST00000560396 BCORQ6W2J9 1755 aa18.36■□□□□ 0.53
IDH3A-218ENST00000560396 NBPF15Q8N660 670 aa18.36■□□□□ 0.53
IDH3A-218ENST00000560396 DICER1Q9UPY3 1922 aaKnown RBP18.36■□□□□ 0.53
IDH3A-218ENST00000560396 ALDH1B1P30837 517 aa18.35■□□□□ 0.53
IDH3A-218ENST00000560396 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
IDH3A-218ENST00000560396 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
IDH3A-218ENST00000560396 SLX4Q8IY92 1834 aa18.35■□□□□ 0.53
IDH3A-218ENST00000560396 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
IDH3A-218ENST00000560396 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
IDH3A-218ENST00000560396 POTECB2RU33 542 aa18.34■□□□□ 0.53
IDH3A-218ENST00000560396 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
IDH3A-218ENST00000560396 FAM177BA6PVY3 158 aa18.33■□□□□ 0.52
IDH3A-218ENST00000560396 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
IDH3A-218ENST00000560396 C7orf43Q8WVR3 580 aa18.33■□□□□ 0.52
IDH3A-218ENST00000560396 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
IDH3A-218ENST00000560396 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
IDH3A-218ENST00000560396 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
IDH3A-218ENST00000560396 CACNA1SQ13698 1873 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
IDH3A-218ENST00000560396 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 HLFQ16534 295 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 CHADLQ6NUI6 762 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 KIF6Q6ZMV9 814 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
IDH3A-218ENST00000560396 RRP7AQ9Y3A4 280 aaKnown RBP18.31■□□□□ 0.52
IDH3A-218ENST00000560396 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
IDH3A-218ENST00000560396 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
IDH3A-218ENST00000560396 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
IDH3A-218ENST00000560396 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
IDH3A-218ENST00000560396 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
IDH3A-218ENST00000560396 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
IDH3A-218ENST00000560396 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
IDH3A-218ENST00000560396 ZNF277Q9NRM2 450 aaPredicted RBP18.27■□□□□ 0.52
IDH3A-218ENST00000560396 DLG5Q8TDM6 1919 aa18.26■□□□□ 0.51
IDH3A-218ENST00000560396 MYL6BP14649 208 aa18.26■□□□□ 0.51
IDH3A-218ENST00000560396 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
IDH3A-218ENST00000560396 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
IDH3A-218ENST00000560396 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
IDH3A-218ENST00000560396 ERBB4Q15303 1308 aa18.25■□□□□ 0.51
IDH3A-218ENST00000560396 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
IDH3A-218ENST00000560396 IARSP41252 1262 aaKnown RBP18.25■□□□□ 0.51
IDH3A-218ENST00000560396 CRY2Q49AN0 593 aa18.25■□□□□ 0.51
IDH3A-218ENST00000560396 JDP2Q8WYK2 163 aa18.25■□□□□ 0.51
IDH3A-218ENST00000560396 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
IDH3A-218ENST00000560396 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
IDH3A-218ENST00000560396 COL13A1Q5TAT6 717 aaPredicted RBP18.24■□□□□ 0.51
IDH3A-218ENST00000560396 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 PSMD1Q99460 953 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 THUMPD2Q9BTF0 503 aaKnown RBP18.24■□□□□ 0.51
IDH3A-218ENST00000560396 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
IDH3A-218ENST00000560396 SCN4AP35499 1836 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
IDH3A-218ENST00000560396 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 NUP98P52948 1817 aa18.23■□□□□ 0.51
IDH3A-218ENST00000560396 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
IDH3A-218ENST00000560396 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
IDH3A-218ENST00000560396 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
IDH3A-218ENST00000560396 GPTP24298 496 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
IDH3A-218ENST00000560396 RIPK4P57078 832 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 RALBP1Q15311 655 aa18.22■□□□□ 0.51
IDH3A-218ENST00000560396 EAPPQ56P03 285 aaPredicted RBP18.22■□□□□ 0.51
IDH3A-218ENST00000560396 GIGYF2Q6Y7W6 1299 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms