RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	BICC1	Q9H694	974 aa	Known RBP	7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	C9orf78	Q9NZ63	289 aa	Predicted RBP	7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	NPHP3	Q7Z494	1330 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	SASH1	O94885	1247 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	REC8	O95072	547 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	CYP2E1	P05181	493 aa	Predicted RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	RASEF	Q8IZ41	740 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	XAGE3	Q8WTP9	111 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	SLC52A2	Q9HAB3	445 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	NDUFB9	Q9Y6M9	179 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	HOXB7	P09629	217 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	MCTP1	Q6DN14	999 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	CASC1	Q6TDU7	716 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	CWC27	Q6UX04	472 aa	Known RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	COPS6	Q7L5N1	327 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	RAPGEF4	Q8WZA2	1011 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	TMX3	Q96JJ7	454 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	ARFGEF2	Q9Y6D5	1785 aa		7.04	□□□□□ -1.28
LRRC49-223	ENST00000560369	GLI3	P10071	1580 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	ATP5J2-PTCD1	G3V325	749 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	PTCD1	O75127	700 aa	Known RBP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	PTH1R	Q03431	593 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	OS9	Q13438	667 aa	Predicted RBP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	LRP10	Q7Z4F1	713 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	EDC3	Q96F86	508 aa	Known RBP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	MYD88	Q99836	296 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	EAF2	Q96CJ1	260 aa	Predicted RBP	7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	KIF1BP	Q96EK5	621 aa		7.03	□□□□□ -1.28
LRRC49-223	ENST00000560369	ERBB4	Q15303	1308 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	GRM8	O00222	908 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	TAT	P17735	454 aa	Predicted RBP	7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	RIC3	Q7Z5B4	369 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	RBM27	Q9P2N5	1060 aa	Known RBP	7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	TAF6L	Q9Y6J9	622 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	PKD1L3	Q7Z443	1732 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	STRC	Q7RTU9	1775 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	DDX11L8	A8MPP1	907 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	NEURL1B	A8MQ27	555 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	RAB11FIP3	O75154	756 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	CLCN1	P35523	988 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	FAM227B	Q96M60	508 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	LSG1	Q9H089	658 aa	Known RBP	7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	GRPEL1	Q9HAV7	217 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	CCDC9	Q9Y3X0	531 aa	Known RBP	7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	SHANK3	Q9BYB0	1731 aa		7.02	□□□□□ -1.29
LRRC49-223	ENST00000560369	SPATA31A3	Q5VYP0	1347 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	SGSM2	O43147	1006 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	ST18	O60284	1047 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	LARGE1	O95461	756 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	MTX1	Q13505	466 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	ADCK5	Q3MIX3	580 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	SLFNL1	Q499Z3	407 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	BRINP3	Q76B58	766 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	AACS	Q86V21	672 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	LINS1	Q8NG48	757 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	GBP4	Q96PP9	640 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	LMBRD1	Q9NUN5	540 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	HYPK	Q9NX55	129 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	SNX14	Q9Y5W7	946 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	TNS3	Q68CZ2	1445 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	NBPF26	B4DH59	902 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	ALDH1L1	O75891	902 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	HSPA4	P34932	840 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	TPRN	Q4KMQ1	711 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	NBPF14	Q5TI25	921 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	NBPF10	Q6P3W6	841 aa	Known RBP	7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	IFNL2	Q8IZJ0	200 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	NBPF15	Q8N660	670 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	GPT2	Q8TD30	523 aa		7.01	□□□□□ -1.29
LRRC49-223	ENST00000560369	OVOS2	A0A0G2JMS6	1433 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	PRPF40A	O75400	957 aa	Known RBP	7	□□□□□ -1.29
LRRC49-223	ENST00000560369	NCL	P19338	710 aa	Known RBP	7	□□□□□ -1.29
LRRC49-223	ENST00000560369	MRE11	P49959	708 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	GCKR	Q14397	625 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	TTLL7	Q6ZT98	887 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	BOLA2	Q9H3K6	86 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	GDPD2	Q9HCC8	539 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	7	□□□□□ -1.29
LRRC49-223	ENST00000560369	A1BG	P04217	495 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	UBE3B	Q7Z3V4	1068 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	VSIG10	Q8N0Z9	540 aa		7	□□□□□ -1.29
LRRC49-223	ENST00000560369	DDX49	Q9Y6V7	483 aa	Known RBP	7	□□□□□ -1.29
LRRC49-223	ENST00000560369	UTY	O14607	1347 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	AOX1	Q06278	1338 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	CAVIN1	Q6NZI2	390 aa	Known RBP	6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	CLEC17A	Q6ZS10	378 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	ANKRD13D	Q6ZTN6	518 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	CLASRP	Q8N2M8	674 aa	Known RBP	6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	TCEANC2	Q96MN5	208 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	STRN4	Q9NRL3	753 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	TOGARAM1	Q9Y4F4	1720 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	RAD50	Q92878	1312 aa		6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369	USP42	Q9H9J4	1324 aa	Known RBP	6.99	□□□□□ -1.29
LRRC49-223	ENST00000560369		A0A0D9SFI3	127 aa		6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms