RNA–Protein interactions for RNA: ENST00000560262.5

NEO1-207, Transcript of neogenin 1, humanhuman

TSL 1 (best) BASIC

Gene NEO1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-207ENST00000560262 LETM1O95202 739 aaPredicted RBP19.05■□□□□ 0.64
NEO1-207ENST00000560262 HMGB2P26583 209 aaKnown RBP19.05■□□□□ 0.64
NEO1-207ENST00000560262 RFC4P35249 363 aa19.05■□□□□ 0.64
NEO1-207ENST00000560262 TNMDQ9H2S6 317 aa19.05■□□□□ 0.64
NEO1-207ENST00000560262 CHL1O00533 1208 aa19.05■□□□□ 0.64
NEO1-207ENST00000560262 LIMCH1Q9UPQ0 1083 aa19.05■□□□□ 0.64
NEO1-207ENST00000560262 HAND2P61296 217 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 DCTPP1Q9H773 170 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
NEO1-207ENST00000560262 SIRT1Q96EB6 747 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 CFAP45Q9UL16 551 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 METP08581 1390 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 MPNDQ8N594 471 aa19.04■□□□□ 0.64
NEO1-207ENST00000560262 DDX21Q9NR30 783 aaKnown RBP eCLIP19.04■□□□□ 0.64
NEO1-207ENST00000560262 SOGA3Q5TF21 947 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 ADGBQ8N7X0 1667 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 RANBP6O60518 1105 aaKnown RBP19.03■□□□□ 0.64
NEO1-207ENST00000560262 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
NEO1-207ENST00000560262 POLR3DP05423 398 aaPredicted RBP19.03■□□□□ 0.64
NEO1-207ENST00000560262 IQSEC3Q9UPP2 1182 aaPredicted RBP19.03■□□□□ 0.64
NEO1-207ENST00000560262 CDK5RAP3Q96JB5 506 aa19.02■□□□□ 0.64
NEO1-207ENST00000560262 CCDC192P0DO97 292 aa19.02■□□□□ 0.64
NEO1-207ENST00000560262 GUCY1B3Q02153 619 aa19.02■□□□□ 0.64
NEO1-207ENST00000560262 SH2B1Q9NRF2 756 aaPredicted RBP19.02■□□□□ 0.64
NEO1-207ENST00000560262 SLAIN2Q9P270 581 aa19.02■□□□□ 0.64
NEO1-207ENST00000560262 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.64
NEO1-207ENST00000560262 PDILTQ8N807 584 aa19.02■□□□□ 0.63
NEO1-207ENST00000560262 NIP7Q9Y221 180 aaKnown RBP eCLIP19.02■□□□□ 0.63
NEO1-207ENST00000560262 CHD1O14646 1710 aa19.02■□□□□ 0.63
NEO1-207ENST00000560262 FAM43AQ8N2R8 423 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 LMTK3Q96Q04 1460 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
NEO1-207ENST00000560262 SSFA2P28290 1259 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
NEO1-207ENST00000560262 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
NEO1-207ENST00000560262 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
NEO1-207ENST00000560262 SMC2O95347 1197 aa19■□□□□ 0.63
NEO1-207ENST00000560262 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
NEO1-207ENST00000560262 TCEANC2Q96MN5 208 aa19■□□□□ 0.63
NEO1-207ENST00000560262 SMARCC1Q92922 1105 aaPredicted RBP19■□□□□ 0.63
NEO1-207ENST00000560262 HMGB1P09429 215 aaKnown RBP19■□□□□ 0.63
NEO1-207ENST00000560262 CCDC152Q4G0S7 254 aa18.99■□□□□ 0.63
NEO1-207ENST00000560262 TMOD2Q9NZR1 351 aa18.99■□□□□ 0.63
NEO1-207ENST00000560262 NOL7Q9UMY1 257 aaKnown RBP18.99■□□□□ 0.63
NEO1-207ENST00000560262 IFIT3O14879 490 aaKnown RBP18.99■□□□□ 0.63
NEO1-207ENST00000560262 IL15P40933 162 aaPredicted RBP18.99■□□□□ 0.63
NEO1-207ENST00000560262 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
NEO1-207ENST00000560262 PCDH11XQ9BZA7 1347 aa18.98■□□□□ 0.63
NEO1-207ENST00000560262 PCDH11YQ9BZA8 1340 aa18.98■□□□□ 0.63
NEO1-207ENST00000560262 BRPF1P55201 1214 aaPredicted RBP18.98■□□□□ 0.63
NEO1-207ENST00000560262 SETDB2Q96T68 719 aa18.98■□□□□ 0.63
NEO1-207ENST00000560262 MAGI2Q86UL8 1455 aa18.98■□□□□ 0.63
NEO1-207ENST00000560262 PDIA4P13667 645 aaKnown RBP18.98■□□□□ 0.63
NEO1-207ENST00000560262 SPC24Q8NBT2 197 aa18.98■□□□□ 0.63
NEO1-207ENST00000560262 TTF1Q15361 905 aaPredicted RBP18.97■□□□□ 0.63
NEO1-207ENST00000560262 NUP62CLQ9H1M0 184 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 C8orf76Q96K31 380 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 NLRP3Q96P20 1036 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 GOLGA8BA8MQT2 603 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 HELBQ8NG08 1087 aaPredicted RBP18.97■□□□□ 0.63
NEO1-207ENST00000560262 GDPD2Q9HCC8 539 aa18.97■□□□□ 0.63
NEO1-207ENST00000560262 ESYT1Q9BSJ8 1104 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 MPHOSPH10O00566 681 aaKnown RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 CRACR2BQ8N4Y2 399 aaPredicted RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 WASF1Q92558 559 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 TNPO1Q92973 898 aaKnown RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 NEK1Q96PY6 1258 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 GRPEL1Q9HAV7 217 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 ZNF287Q9HBT7 754 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 KRT18P05783 430 aaKnown RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 CTCFLQ8NI51 663 aaPredicted RBP18.96■□□□□ 0.63
NEO1-207ENST00000560262 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
NEO1-207ENST00000560262 CCDC196A0A1B0GTZ2 297 aa18.95■□□□□ 0.62
NEO1-207ENST00000560262 OFD1O75665 1012 aa18.95■□□□□ 0.62
NEO1-207ENST00000560262 SLC12A7Q9Y666 1083 aa18.95■□□□□ 0.62
NEO1-207ENST00000560262 SYCE3A1L190 88 aa18.95■□□□□ 0.62
NEO1-207ENST00000560262 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
NEO1-207ENST00000560262 ZCCHC11Q5TAX3 1644 aaKnown RBP18.95■□□□□ 0.62
NEO1-207ENST00000560262 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
NEO1-207ENST00000560262 RNF41Q9H4P4 317 aaPredicted RBP18.95■□□□□ 0.62
NEO1-207ENST00000560262 A1BGP04217 495 aa18.94■□□□□ 0.62
NEO1-207ENST00000560262 ZNF444Q8N0Y2 327 aaPredicted RBP18.94■□□□□ 0.62
NEO1-207ENST00000560262 ZHX3Q9H4I2 956 aa18.94■□□□□ 0.62
NEO1-207ENST00000560262 BICC1Q9H694 974 aaKnown RBP18.94■□□□□ 0.62
NEO1-207ENST00000560262 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
NEO1-207ENST00000560262 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
NEO1-207ENST00000560262 HMGN5P82970 282 aaKnown RBP18.94■□□□□ 0.62
NEO1-207ENST00000560262 TFIP11Q9UBB9 837 aaKnown RBP18.94■□□□□ 0.62
NEO1-207ENST00000560262 IRS4O14654 1257 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms