RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
CRNDE-208ENST00000560029 TPSG1Q9NRR2 321 aa9.83□□□□□ -0.84
CRNDE-208ENST00000560029 SAMD5Q5TGI4 173 aa9.82□□□□□ -0.84
CRNDE-208ENST00000560029 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
CRNDE-208ENST00000560029 M0R082 166 aa9.81□□□□□ -0.84
CRNDE-208ENST00000560029 SFSWAPQ12872 951 aaKnown RBP9.81□□□□□ -0.84
CRNDE-208ENST00000560029 ZNF417Q8TAU3 575 aa9.81□□□□□ -0.84
CRNDE-208ENST00000560029 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
CRNDE-208ENST00000560029 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
CRNDE-208ENST00000560029 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
CRNDE-208ENST00000560029 SCO2A0A1W2PP80 73 aa9.8□□□□□ -0.84
CRNDE-208ENST00000560029 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
CRNDE-208ENST00000560029 NKAPLQ5M9Q1 402 aa9.8□□□□□ -0.84
CRNDE-208ENST00000560029 RAB44Q7Z6P3 723 aaPredicted RBP9.8□□□□□ -0.84
CRNDE-208ENST00000560029 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
CRNDE-208ENST00000560029 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 APBA3O96018 575 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 PSME1Q06323 249 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 FNBP4Q8N3X1 1017 aaPredicted RBP9.79□□□□□ -0.84
CRNDE-208ENST00000560029 MDFIQ99750 246 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 ZNF358Q9NW07 568 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 ZNF232Q9UNY5 417 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 STARD13Q9Y3M8 1113 aa9.79□□□□□ -0.84
CRNDE-208ENST00000560029 SKIP12755 728 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 NOS2P35228 1153 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 GTF2IP78347 998 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
CRNDE-208ENST00000560029 GRIK4Q16099 956 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 NEUROD4Q9HD90 331 aa9.78□□□□□ -0.84
CRNDE-208ENST00000560029 BACH1O14867 736 aa9.77□□□□□ -0.85
CRNDE-208ENST00000560029 ALBP02768 609 aa9.77□□□□□ -0.85
CRNDE-208ENST00000560029 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
CRNDE-208ENST00000560029 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 SIN3BO75182 1162 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 EML3Q32P44 896 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 DEPDC4Q8N2C3 294 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 C7orf43Q8WVR3 580 aa9.76□□□□□ -0.85
CRNDE-208ENST00000560029 EML1O00423 815 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 DYRK3O43781 588 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
CRNDE-208ENST00000560029 TEAD4Q15561 434 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
CRNDE-208ENST00000560029 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
CRNDE-208ENST00000560029 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
CRNDE-208ENST00000560029 WWC1Q8IX03 1113 aa9.74□□□□□ -0.85
CRNDE-208ENST00000560029 EPHA4P54764 986 aa9.73□□□□□ -0.85
CRNDE-208ENST00000560029 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
CRNDE-208ENST00000560029 NCOA4Q13772 614 aa9.73□□□□□ -0.85
CRNDE-208ENST00000560029 ADH7P40394 386 aa9.72□□□□□ -0.85
CRNDE-208ENST00000560029 PRSS36Q5K4E3 855 aa9.72□□□□□ -0.85
CRNDE-208ENST00000560029 RHPN1Q8TCX5 695 aa9.72□□□□□ -0.85
CRNDE-208ENST00000560029 HSH2DQ96JZ2 352 aa9.72□□□□□ -0.85
CRNDE-208ENST00000560029 HCN4Q9Y3Q4 1203 aa9.72□□□□□ -0.85
CRNDE-208ENST00000560029 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
CRNDE-208ENST00000560029 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
CRNDE-208ENST00000560029 SOX11P35716 441 aa9.71□□□□□ -0.86
CRNDE-208ENST00000560029 TNFRSF25Q93038 417 aa9.71□□□□□ -0.86
CRNDE-208ENST00000560029 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 NID1P14543 1247 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
CRNDE-208ENST00000560029 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
CRNDE-208ENST00000560029 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
CRNDE-208ENST00000560029 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
CRNDE-208ENST00000560029 PRDM6Q9NQX0 595 aa9.69□□□□□ -0.86
CRNDE-208ENST00000560029 ALG2Q9H553 416 aa9.68□□□□□ -0.86
CRNDE-208ENST00000560029 ZFP64Q9NPA5 681 aa9.68□□□□□ -0.86
CRNDE-208ENST00000560029 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
CRNDE-208ENST00000560029 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
CRNDE-208ENST00000560029 BHMTQ93088 406 aa9.67□□□□□ -0.86
CRNDE-208ENST00000560029 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
CRNDE-208ENST00000560029 TSPAN10Q9H1Z9 355 aaPredicted RBP9.67□□□□□ -0.86
CRNDE-208ENST00000560029 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
CRNDE-208ENST00000560029 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
CRNDE-208ENST00000560029 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.86
CRNDE-208ENST00000560029 SELPP16109 830 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 NUDT8Q8WV74 236 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 PHACTR1Q9C0D0 580 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
CRNDE-208ENST00000560029 LILRB5O75023 590 aa9.64□□□□□ -0.87
CRNDE-208ENST00000560029 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
CRNDE-208ENST00000560029 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-208ENST00000560029 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
CRNDE-208ENST00000560029 GLMNQ92990 594 aa9.63□□□□□ -0.87
CRNDE-208ENST00000560029 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
CRNDE-208ENST00000560029 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
CRNDE-208ENST00000560029 ARID3AQ99856 593 aa9.63□□□□□ -0.87
CRNDE-208ENST00000560029 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-208ENST00000560029 C9orf172C9J069 976 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms