RNA–Protein interactions for RNA: ENST00000559948.5

PSMA4-216, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-216ENST00000559948 PDE6BP35913 854 aa11.77□□□□□ -0.53
PSMA4-216ENST00000559948 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
PSMA4-216ENST00000559948 HTRA3P83110 453 aa11.77□□□□□ -0.53
PSMA4-216ENST00000559948 NBPF10Q6P3W6 841 aaKnown RBP11.77□□□□□ -0.53
PSMA4-216ENST00000559948 NBPF15Q8N660 670 aa11.77□□□□□ -0.53
PSMA4-216ENST00000559948 SETDB2Q96T68 719 aa11.77□□□□□ -0.53
PSMA4-216ENST00000559948 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
PSMA4-216ENST00000559948 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
PSMA4-216ENST00000559948 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
PSMA4-216ENST00000559948 C21orf2O43822 256 aa11.76□□□□□ -0.53
PSMA4-216ENST00000559948 SRGNP10124 158 aa11.76□□□□□ -0.53
PSMA4-216ENST00000559948 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
PSMA4-216ENST00000559948 DZIP3Q86Y13 1208 aaKnown RBP11.76□□□□□ -0.53
PSMA4-216ENST00000559948 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
PSMA4-216ENST00000559948 SBF1O95248 1867 aa11.76□□□□□ -0.53
PSMA4-216ENST00000559948 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
PSMA4-216ENST00000559948 TAF7Q15545 349 aaPredicted RBP11.75□□□□□ -0.53
PSMA4-216ENST00000559948 RTF1Q92541 710 aaKnown RBP11.75□□□□□ -0.53
PSMA4-216ENST00000559948 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
PSMA4-216ENST00000559948 PLEKHF1Q96S99 279 aa11.75□□□□□ -0.53
PSMA4-216ENST00000559948 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
PSMA4-216ENST00000559948 ATXN8OSP0DMR3 200 aa11.74□□□□□ -0.53
PSMA4-216ENST00000559948 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
PSMA4-216ENST00000559948 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
PSMA4-216ENST00000559948 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
PSMA4-216ENST00000559948 RGL2O15211 777 aa11.73□□□□□ -0.53
PSMA4-216ENST00000559948 HLFQ16534 295 aa11.73□□□□□ -0.53
PSMA4-216ENST00000559948 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
PSMA4-216ENST00000559948 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
PSMA4-216ENST00000559948 ANKRD31Q8N7Z5 1873 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 LTBP3Q9NS15 1303 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
PSMA4-216ENST00000559948 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
PSMA4-216ENST00000559948 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 MASTLQ96GX5 879 aa11.72□□□□□ -0.53
PSMA4-216ENST00000559948 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
PSMA4-216ENST00000559948 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
PSMA4-216ENST00000559948 NBPF5PQ86XG9 351 aaPredicted RBP11.71□□□□□ -0.53
PSMA4-216ENST00000559948 SCN7AQ01118 1682 aa11.71□□□□□ -0.54
PSMA4-216ENST00000559948 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
PSMA4-216ENST00000559948 ST5P78524 1137 aa11.7□□□□□ -0.54
PSMA4-216ENST00000559948 TPTE2Q6XPS3 522 aa11.7□□□□□ -0.54
PSMA4-216ENST00000559948 TAOK3Q9H2K8 898 aa11.7□□□□□ -0.54
PSMA4-216ENST00000559948 DDNO94850 711 aaPredicted RBP11.69□□□□□ -0.54
PSMA4-216ENST00000559948 NPR1P16066 1061 aa11.69□□□□□ -0.54
PSMA4-216ENST00000559948 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
PSMA4-216ENST00000559948 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.54
PSMA4-216ENST00000559948 ZNF652Q9Y2D9 606 aa11.69□□□□□ -0.54
PSMA4-216ENST00000559948 SLX4Q8IY92 1834 aa11.68□□□□□ -0.54
PSMA4-216ENST00000559948 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
PSMA4-216ENST00000559948 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
PSMA4-216ENST00000559948 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
PSMA4-216ENST00000559948 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
PSMA4-216ENST00000559948 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
PSMA4-216ENST00000559948 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-216ENST00000559948 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 NPHP1O15259 732 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 ABCB7O75027 752 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 CRY2Q49AN0 593 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 TTLL7Q6ZT98 887 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 FER1L6Q2WGJ9 1857 aa11.67□□□□□ -0.54
PSMA4-216ENST00000559948 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
PSMA4-216ENST00000559948 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
PSMA4-216ENST00000559948 RRP7AQ9Y3A4 280 aaKnown RBP11.66□□□□□ -0.54
PSMA4-216ENST00000559948 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
PSMA4-216ENST00000559948 MAP3K15Q6ZN16 1313 aa11.65□□□□□ -0.54
PSMA4-216ENST00000559948 ALDH1B1P30837 517 aa11.65□□□□□ -0.54
PSMA4-216ENST00000559948 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
PSMA4-216ENST00000559948 PDIA6Q15084 440 aa11.65□□□□□ -0.54
PSMA4-216ENST00000559948 CCDC93Q567U6 631 aa11.65□□□□□ -0.54
PSMA4-216ENST00000559948 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
PSMA4-216ENST00000559948 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
PSMA4-216ENST00000559948 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
PSMA4-216ENST00000559948 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 CCDC88AQ3V6T2 1871 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 FZD9O00144 591 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 HOXA10P31260 410 aaPredicted RBP11.64□□□□□ -0.55
PSMA4-216ENST00000559948 SUSD4Q5VX71 490 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
PSMA4-216ENST00000559948 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
PSMA4-216ENST00000559948 NEFMP07197 916 aa11.63□□□□□ -0.55
PSMA4-216ENST00000559948 MYL6BP14649 208 aa11.63□□□□□ -0.55
PSMA4-216ENST00000559948 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
PSMA4-216ENST00000559948 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
PSMA4-216ENST00000559948 TAF1DQ9H5J8 278 aaPredicted RBP11.63□□□□□ -0.55
PSMA4-216ENST00000559948 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
PSMA4-216ENST00000559948 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
PSMA4-216ENST00000559948 RIPK4P57078 832 aa11.62□□□□□ -0.55
PSMA4-216ENST00000559948 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
PSMA4-216ENST00000559948 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
PSMA4-216ENST00000559948 NYXQ9GZU5 481 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms