RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 TAF1DQ9H5J8 278 aaPredicted RBP21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 THSD7BQ9C0I4 1608 aa21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 KCNQ3O43525 872 aa21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 ITGBL1O95965 494 aaPredicted RBP21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 IL6STP40189 918 aaPredicted RBP21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 C7orf43Q8WVR3 580 aa21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 PDZRN3Q9UPQ7 1066 aa21.18■□□□□ 0.98
AC243562.3-201ENST00000559866 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
AC243562.3-201ENST00000559866 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
AC243562.3-201ENST00000559866 COL4A5P29400 1685 aa21.17■□□□□ 0.98
AC243562.3-201ENST00000559866 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
AC243562.3-201ENST00000559866 MASTLQ96GX5 879 aa21.16■□□□□ 0.98
AC243562.3-201ENST00000559866 SETDB2Q96T68 719 aa21.16■□□□□ 0.98
AC243562.3-201ENST00000559866 PRDM10Q9NQV6 1147 aa21.16■□□□□ 0.98
AC243562.3-201ENST00000559866 PRAMEF22A3QJZ6 481 aa21.15■□□□□ 0.98
AC243562.3-201ENST00000559866 ST5P78524 1137 aa21.14■□□□□ 0.97
AC243562.3-201ENST00000559866 ZNF277Q9NRM2 450 aaPredicted RBP21.14■□□□□ 0.97
AC243562.3-201ENST00000559866 SNED1Q8TER0 1413 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 CEMIPQ8WUJ3 1361 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 IQCA1LA6NCM1 817 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 TMEM88BA6NKF7 163 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 LBX1P52954 281 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 TEFQ10587 303 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 EAPPQ56P03 285 aaPredicted RBP21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 WBP1LQ9NX94 342 aa21.13■□□□□ 0.97
AC243562.3-201ENST00000559866 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
AC243562.3-201ENST00000559866 KIF7Q2M1P5 1343 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 RNF123Q5XPI4 1314 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 LAMB4A4D0S4 1761 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 GNAT3A8MTJ3 354 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 NPHP1O15259 732 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 CCDC93Q567U6 631 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 USP16Q9Y5T5 823 aa21.11■□□□□ 0.97
AC243562.3-201ENST00000559866 HSPA8P11142 646 aaKnown RBP21.1■□□□□ 0.97
AC243562.3-201ENST00000559866 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.97
AC243562.3-201ENST00000559866 CC2D1BQ5T0F9 858 aaKnown RBP21.1■□□□□ 0.97
AC243562.3-201ENST00000559866 SOGA3Q5TF21 947 aa21.1■□□□□ 0.97
AC243562.3-201ENST00000559866 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
AC243562.3-201ENST00000559866 MAP1SQ66K74 1059 aaPredicted RBP21.09■□□□□ 0.97
AC243562.3-201ENST00000559866 AIDAQ96BJ3 306 aa21.09■□□□□ 0.97
AC243562.3-201ENST00000559866 RASSF10A6NK89 507 aa21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 EPHX2P34913 555 aa21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 FMR1Q06787 632 aaKnown RBP eCLIP21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 SLC51AQ86UW1 340 aa21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 NBPF5PQ86XG9 351 aaPredicted RBP21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 HACL1Q9UJ83 578 aa21.08■□□□□ 0.97
AC243562.3-201ENST00000559866 KLRG2A4D1S0 409 aaPredicted RBP21.07■□□□□ 0.96
AC243562.3-201ENST00000559866 U2SURPO15042 1029 aaKnown RBP21.07■□□□□ 0.96
AC243562.3-201ENST00000559866 PHACTR3Q96KR7 559 aa21.07■□□□□ 0.96
AC243562.3-201ENST00000559866 CLEC11AQ9Y240 323 aa21.07■□□□□ 0.96
AC243562.3-201ENST00000559866 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
AC243562.3-201ENST00000559866 SLC34A2O95436 690 aa21.06■□□□□ 0.96
AC243562.3-201ENST00000559866 NPR1P16066 1061 aa21.06■□□□□ 0.96
AC243562.3-201ENST00000559866 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
AC243562.3-201ENST00000559866 NUP98P52948 1817 aa21.06■□□□□ 0.96
AC243562.3-201ENST00000559866 FAM177BA6PVY3 158 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 BTBD11A6QL63 1104 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 NBPF26B4DH59 902 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 FZD9O00144 591 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 NBPF10Q6P3W6 841 aaKnown RBP21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 CNTROBQ8N137 903 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 NBPF15Q8N660 670 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 ABHD8Q96I13 439 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 ABCC12Q96J65 1359 aa21.05■□□□□ 0.96
AC243562.3-201ENST00000559866 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
AC243562.3-201ENST00000559866 CNGB1Q14028 1251 aaPredicted RBP21.04■□□□□ 0.96
AC243562.3-201ENST00000559866 FAM161AQ3B820 660 aa21.04■□□□□ 0.96
AC243562.3-201ENST00000559866 WDR33Q9C0J8 1336 aaKnown RBP21.04■□□□□ 0.96
AC243562.3-201ENST00000559866 DEFB115Q30KQ5 88 aa21.03■□□□□ 0.96
AC243562.3-201ENST00000559866 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
AC243562.3-201ENST00000559866 HLFQ16534 295 aa21.02■□□□□ 0.96
AC243562.3-201ENST00000559866 CLEC4GQ6UXB4 293 aa21.02■□□□□ 0.96
AC243562.3-201ENST00000559866 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
AC243562.3-201ENST00000559866 NIP7Q9Y221 180 aaKnown RBP eCLIP21.02■□□□□ 0.96
AC243562.3-201ENST00000559866 KDM3BQ7LBC6 1761 aa21.02■□□□□ 0.96
AC243562.3-201ENST00000559866 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
AC243562.3-201ENST00000559866 PRKAR2BP31323 418 aa21■□□□□ 0.95
AC243562.3-201ENST00000559866 RTKN2Q8IZC4 609 aa21■□□□□ 0.95
AC243562.3-201ENST00000559866 GPC2Q8N158 579 aa21■□□□□ 0.95
AC243562.3-201ENST00000559866 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
AC243562.3-201ENST00000559866 ABT1Q9ULW3 272 aaKnown RBP21■□□□□ 0.95
AC243562.3-201ENST00000559866 MCM10Q7L590 875 aa20.99■□□□□ 0.95
AC243562.3-201ENST00000559866 PNMA8AQ86V59 439 aaPredicted RBP20.99■□□□□ 0.95
AC243562.3-201ENST00000559866 DDX21Q9NR30 783 aaKnown RBP eCLIP20.99■□□□□ 0.95
AC243562.3-201ENST00000559866 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
AC243562.3-201ENST00000559866 TPTE2Q6XPS3 522 aa20.98■□□□□ 0.95
AC243562.3-201ENST00000559866 ZNF652Q9Y2D9 606 aa20.98■□□□□ 0.95
AC243562.3-201ENST00000559866 SCNN1DP51172 638 aa20.97■□□□□ 0.95
AC243562.3-201ENST00000559866 DCTN1Q14203 1278 aa20.97■□□□□ 0.95
AC243562.3-201ENST00000559866 GJA3Q9Y6H8 435 aa20.97■□□□□ 0.95
AC243562.3-201ENST00000559866 TRAF5O00463 557 aa20.96■□□□□ 0.95
AC243562.3-201ENST00000559866 SNRPA1P09661 255 aaKnown RBP20.96■□□□□ 0.95
AC243562.3-201ENST00000559866 EPS15P42566 896 aa20.96■□□□□ 0.95
AC243562.3-201ENST00000559866 CYP4F22Q6NT55 531 aa20.96■□□□□ 0.95
AC243562.3-201ENST00000559866 NUTM1Q86Y26 1132 aa20.96■□□□□ 0.95
AC243562.3-201ENST00000559866 PSMD1Q99460 953 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms