RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CRKLP46109 303 aaKnown RBP21.86■■□□□ 1.09
CHRNA3-206ENST00000559658 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
CHRNA3-206ENST00000559658 USP44Q9H0E7 712 aa21.86■■□□□ 1.09
CHRNA3-206ENST00000559658 ZBTB3Q9H5J0 574 aa21.86■■□□□ 1.09
CHRNA3-206ENST00000559658 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
CHRNA3-206ENST00000559658 SIRT2Q8IXJ6 389 aa21.85■■□□□ 1.09
CHRNA3-206ENST00000559658 AAMPQ13685 434 aa21.84■■□□□ 1.09
CHRNA3-206ENST00000559658 MYD88Q99836 296 aa21.84■■□□□ 1.09
CHRNA3-206ENST00000559658 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
CHRNA3-206ENST00000559658 NBPF7P0C2Y1 421 aaPredicted RBP21.83■■□□□ 1.08
CHRNA3-206ENST00000559658 SMIM5Q71RC9 77 aa21.83■■□□□ 1.08
CHRNA3-206ENST00000559658 PLBD2Q8NHP8 589 aa21.83■■□□□ 1.08
CHRNA3-206ENST00000559658 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.08
CHRNA3-206ENST00000559658 METTL22Q9BUU2 404 aaPredicted RBP21.82■■□□□ 1.08
CHRNA3-206ENST00000559658 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
CHRNA3-206ENST00000559658 TNS1Q9HBL0 1735 aaKnown RBP21.81■■□□□ 1.08
CHRNA3-206ENST00000559658 CCNL1Q9UK58 526 aaPredicted RBP21.81■■□□□ 1.08
CHRNA3-206ENST00000559658 CENPQQ7L2Z9 268 aaPredicted RBP21.8■■□□□ 1.08
CHRNA3-206ENST00000559658 LINS1Q8NG48 757 aa21.8■■□□□ 1.08
CHRNA3-206ENST00000559658 NEURL1BA8MQ27 555 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 C4BP0C0L5 1744 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 CEP85Q6P2H3 762 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 ILDR1Q86SU0 546 aaPredicted RBP21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 AMIGO3Q86WK7 504 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 ARXQ96QS3 562 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 NUP98P52948 1817 aa21.79■■□□□ 1.08
CHRNA3-206ENST00000559658 ANKRD36CQ5JPF3 1778 aa21.78■■□□□ 1.08
CHRNA3-206ENST00000559658 EIF5P55010 431 aaKnown RBP21.78■■□□□ 1.08
CHRNA3-206ENST00000559658 JARID2Q92833 1246 aaPredicted RBP21.78■■□□□ 1.08
CHRNA3-206ENST00000559658 TBC1D2BQ9UPU7 963 aa21.78■■□□□ 1.08
CHRNA3-206ENST00000559658 ALDH1L1O75891 902 aa21.77■■□□□ 1.08
CHRNA3-206ENST00000559658 IL6STP40189 918 aaPredicted RBP21.77■■□□□ 1.08
CHRNA3-206ENST00000559658 HDAC1Q13547 482 aaPredicted RBP21.77■■□□□ 1.08
CHRNA3-206ENST00000559658 HLFQ16534 295 aa21.77■■□□□ 1.08
CHRNA3-206ENST00000559658 CHMP4BQ9H444 224 aaKnown RBP21.77■■□□□ 1.08
CHRNA3-206ENST00000559658 BCORQ6W2J9 1755 aa21.77■■□□□ 1.07
CHRNA3-206ENST00000559658 UBTFL1P0CB47 393 aaPredicted RBP21.76■■□□□ 1.07
CHRNA3-206ENST00000559658 MAP3K15Q6ZN16 1313 aa21.76■■□□□ 1.07
CHRNA3-206ENST00000559658 COL15A1P39059 1388 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 GNAI2P04899 355 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 GNAI3P08754 354 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 NEXNQ0ZGT2 675 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 GCKRQ14397 625 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 KIF6Q6ZMV9 814 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 RWDD1Q9H446 243 aaPredicted RBP21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 DZIP3Q86Y13 1208 aaKnown RBP21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 ANKRD44Q8N8A2 993 aa21.75■■□□□ 1.07
CHRNA3-206ENST00000559658 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
CHRNA3-206ENST00000559658 PNMA6EA0A0J9YXQ4 647 aa21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 GRM8O00222 908 aa21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 C4AP0C0L4 1744 aa21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 KAZALD1Q96I82 304 aa21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 C9orf78Q9NZ63 289 aaPredicted RBP21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 PROM2Q8N271 834 aa21.73■■□□□ 1.07
CHRNA3-206ENST00000559658 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
CHRNA3-206ENST00000559658 SUCLG2Q96I99 432 aa21.72■■□□□ 1.07
CHRNA3-206ENST00000559658 UTYO14607 1347 aa21.72■■□□□ 1.07
CHRNA3-206ENST00000559658 GNPATO15228 680 aa21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 GPTP24298 496 aa21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 RTL5Q5HYW3 569 aaPredicted RBP21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 GIGYF2Q6Y7W6 1299 aaKnown RBP21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 ISCA1Q9BUE6 129 aa21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 UBR3Q6ZT12 1888 aa21.71■■□□□ 1.07
CHRNA3-206ENST00000559658 CAMTA2O94983 1202 aa21.7■■□□□ 1.06
CHRNA3-206ENST00000559658 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
CHRNA3-206ENST00000559658 UBE3BQ7Z3V4 1068 aa21.7■■□□□ 1.06
CHRNA3-206ENST00000559658 CASP7P55210 303 aa21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 EPHA10Q5JZY3 1008 aa21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 RPAP2Q8IXW5 612 aaPredicted RBP21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 A0A087WZG4 1122 aa21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 PDZRN3Q9UPQ7 1066 aa21.69■■□□□ 1.06
CHRNA3-206ENST00000559658 UBN2Q6ZU65 1347 aa21.68■■□□□ 1.06
CHRNA3-206ENST00000559658 APBA3O96018 575 aa21.68■■□□□ 1.06
CHRNA3-206ENST00000559658 IBTKQ9P2D0 1353 aaPredicted RBP21.68■■□□□ 1.06
CHRNA3-206ENST00000559658 TXNRD1Q16881 649 aa21.67■■□□□ 1.06
CHRNA3-206ENST00000559658 BICC1Q9H694 974 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-206ENST00000559658 CWC25Q9NXE8 425 aaPredicted RBP21.67■■□□□ 1.06
CHRNA3-206ENST00000559658 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 PHF14O94880 888 aa21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 NPM2Q86SE8 214 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 SYNE4Q8N205 404 aa21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-206ENST00000559658 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
CHRNA3-206ENST00000559658 RPS6KA4O75676 772 aa21.65■■□□□ 1.06
CHRNA3-206ENST00000559658 CCDC191Q8NCU4 936 aa21.65■■□□□ 1.06
CHRNA3-206ENST00000559658 H7C1W4 665 aa21.64■■□□□ 1.06
CHRNA3-206ENST00000559658 RGS3P49796 1198 aa21.64■■□□□ 1.06
CHRNA3-206ENST00000559658 NLRP10Q86W26 655 aa21.64■■□□□ 1.06
CHRNA3-206ENST00000559658 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.05
CHRNA3-206ENST00000559658 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.05
CHRNA3-206ENST00000559658 DCTPP1Q9H773 170 aa21.64■■□□□ 1.05
CHRNA3-206ENST00000559658 APBB1O00213 710 aa21.63■■□□□ 1.05
CHRNA3-206ENST00000559658 SRGAP3O43295 1099 aa21.63■■□□□ 1.05
CHRNA3-206ENST00000559658 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms