RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 BRIP1Q9BX63 1249 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 DLEC1Q9Y238 1755 aa11.65□□□□□ -0.54
CLPX-205ENST00000559218 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLPX-205ENST00000559218 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.54
CLPX-205ENST00000559218 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
CLPX-205ENST00000559218 PDE6BP35913 854 aa11.64□□□□□ -0.55
CLPX-205ENST00000559218 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
CLPX-205ENST00000559218 PIP4K2AP48426 406 aaPredicted RBP11.64□□□□□ -0.55
CLPX-205ENST00000559218 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
CLPX-205ENST00000559218 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
CLPX-205ENST00000559218 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
CLPX-205ENST00000559218 VIRMAQ69YN4 1812 aaKnown RBP11.64□□□□□ -0.55
CLPX-205ENST00000559218 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
CLPX-205ENST00000559218 CNBD1Q8NA66 436 aa11.63□□□□□ -0.55
CLPX-205ENST00000559218 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
CLPX-205ENST00000559218 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
CLPX-205ENST00000559218 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
CLPX-205ENST00000559218 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 BTBD11A6QL63 1104 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 PRKAR2BP31323 418 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
CLPX-205ENST00000559218 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 USP16Q9Y5T5 823 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
CLPX-205ENST00000559218 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 NPC1L1Q9UHC9 1359 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
CLPX-205ENST00000559218 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 SRGNP10124 158 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
CLPX-205ENST00000559218 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 TAOK3Q9H2K8 898 aa11.61□□□□□ -0.55
CLPX-205ENST00000559218 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
CLPX-205ENST00000559218 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
CLPX-205ENST00000559218 NPHP1O15259 732 aa11.6□□□□□ -0.55
CLPX-205ENST00000559218 DDNO94850 711 aaPredicted RBP11.6□□□□□ -0.55
CLPX-205ENST00000559218 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
CLPX-205ENST00000559218 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
CLPX-205ENST00000559218 STYK1Q6J9G0 422 aa11.6□□□□□ -0.55
CLPX-205ENST00000559218 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
CLPX-205ENST00000559218 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
CLPX-205ENST00000559218 ST5P78524 1137 aa11.59□□□□□ -0.55
CLPX-205ENST00000559218 MCM10Q7L590 875 aa11.59□□□□□ -0.55
CLPX-205ENST00000559218 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
CLPX-205ENST00000559218 NBPF5PQ86XG9 351 aaPredicted RBP11.59□□□□□ -0.55
CLPX-205ENST00000559218 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
CLPX-205ENST00000559218 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
CLPX-205ENST00000559218 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
CLPX-205ENST00000559218 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
CLPX-205ENST00000559218 SNRPA1P09661 255 aaKnown RBP11.57□□□□□ -0.56
CLPX-205ENST00000559218 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
CLPX-205ENST00000559218 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
CLPX-205ENST00000559218 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
CLPX-205ENST00000559218 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
CLPX-205ENST00000559218 NPR1P16066 1061 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLPX-205ENST00000559218 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 CLEC4GQ6UXB4 293 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 CFAP53Q96M91 514 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
CLPX-205ENST00000559218 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 ZNF541Q9H0D2 1346 aa11.56□□□□□ -0.56
CLPX-205ENST00000559218 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
CLPX-205ENST00000559218 KLRG2A4D1S0 409 aaPredicted RBP11.55□□□□□ -0.56
CLPX-205ENST00000559218 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
CLPX-205ENST00000559218 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
CLPX-205ENST00000559218 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
CLPX-205ENST00000559218 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
CLPX-205ENST00000559218 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
CLPX-205ENST00000559218 MIS18AQ9NYP9 233 aa11.55□□□□□ -0.56
CLPX-205ENST00000559218 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLPX-205ENST00000559218 ZNF652Q9Y2D9 606 aa11.55□□□□□ -0.56
CLPX-205ENST00000559218 HLFQ16534 295 aa11.54□□□□□ -0.56
CLPX-205ENST00000559218 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
CLPX-205ENST00000559218 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
CLPX-205ENST00000559218 NUDCQ9Y266 331 aa11.54□□□□□ -0.56
CLPX-205ENST00000559218 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
CLPX-205ENST00000559218 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
CLPX-205ENST00000559218 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
CLPX-205ENST00000559218 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLPX-205ENST00000559218 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
CLPX-205ENST00000559218 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
CLPX-205ENST00000559218 EAPPQ56P03 285 aaPredicted RBP11.52□□□□□ -0.57
CLPX-205ENST00000559218 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
CLPX-205ENST00000559218 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 HAX1O00165 279 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 RGL2O15211 777 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 FOXN1O15353 648 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms