RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 LARGE1O95461 756 aa19.96■□□□□ 0.79
SPG11-215ENST00000559193 PTH1RQ03431 593 aa19.96■□□□□ 0.79
SPG11-215ENST00000559193 CLASRPQ8N2M8 674 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 CCDC39Q9UFE4 941 aa19.96■□□□□ 0.79
SPG11-215ENST00000559193 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 CASTP20810 708 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 SYT1P21579 422 aa19.96■□□□□ 0.79
SPG11-215ENST00000559193 HSP90AA2PQ14568 343 aaPredicted RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 PLEKHO1Q53GL0 409 aaPredicted RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 PA2G4Q9UQ80 394 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 SETD1BQ9UPS6 1966 aaKnown RBP19.96■□□□□ 0.79
SPG11-215ENST00000559193 STX6O43752 255 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
SPG11-215ENST00000559193 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 ECHDC1Q9NTX5 307 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
SPG11-215ENST00000559193 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.95■□□□□ 0.78
SPG11-215ENST00000559193 MCM5P33992 734 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
SPG11-215ENST00000559193 CHD2O14647 1828 aaKnown RBP19.94■□□□□ 0.78
SPG11-215ENST00000559193 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 TCHHQ07283 1943 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
SPG11-215ENST00000559193 RUFY2Q8WXA3 655 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 SMC3Q9UQE7 1217 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
SPG11-215ENST00000559193 PSME1Q06323 249 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
SPG11-215ENST00000559193 ADCK5Q3MIX3 580 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 KSR2Q6VAB6 950 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 PRAMEF22A3QJZ6 481 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 F13A1P00488 732 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 PRPF40BQ6NWY9 871 aaKnown RBP19.93■□□□□ 0.78
SPG11-215ENST00000559193 KCNB2Q92953 911 aa19.93■□□□□ 0.78
SPG11-215ENST00000559193 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
SPG11-215ENST00000559193 CCDC183Q5T5S1 534 aa19.92■□□□□ 0.78
SPG11-215ENST00000559193 IFIT2P09913 472 aaKnown RBP19.92■□□□□ 0.78
SPG11-215ENST00000559193 TERF1P54274 439 aa19.92■□□□□ 0.78
SPG11-215ENST00000559193 ERC1Q8IUD2 1116 aa19.92■□□□□ 0.78
SPG11-215ENST00000559193 JAKMIP1Q96N16 626 aaKnown RBP19.92■□□□□ 0.78
SPG11-215ENST00000559193 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 VPS53Q5VIR6 699 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 GPATCH3Q96I76 525 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 PDRG1Q9NUG6 133 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 AACSQ86V21 672 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 ZSWIM6Q9HCJ5 1215 aa19.91■□□□□ 0.78
SPG11-215ENST00000559193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.91■□□□□ 0.78
SPG11-215ENST00000559193 UBE2HP62256 183 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 EVI5LQ96CN4 794 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 TM6SF1Q9BZW5 370 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 R3HCC1Q9Y3T6 440 aaKnown RBP19.9■□□□□ 0.78
SPG11-215ENST00000559193 ST3GAL1Q11201 340 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 KAZALD1Q96I82 304 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 SUCLG2Q96I99 432 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 DTNBO60941 627 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 GJB2P29033 226 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 NECTIN1Q15223 517 aa19.9■□□□□ 0.78
SPG11-215ENST00000559193 FIBPO43427 364 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 MTMR6Q9Y217 621 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 CYP46A1Q9Y6A2 500 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 SLIT3O75094 1523 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 SASH1O94885 1247 aa19.89■□□□□ 0.77
SPG11-215ENST00000559193 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
SPG11-215ENST00000559193 GCP02774 474 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 LINS1Q8NG48 757 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 UTYO14607 1347 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 GRM8O00222 908 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 ANKRD24Q8TF21 1146 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 ZSCAN31Q96LW9 406 aaPredicted RBP19.88■□□□□ 0.77
SPG11-215ENST00000559193 SH2B1Q9NRF2 756 aaPredicted RBP19.88■□□□□ 0.77
SPG11-215ENST00000559193 HDAC5Q9UQL6 1122 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 ATP6V1DQ9Y5K8 247 aa19.88■□□□□ 0.77
SPG11-215ENST00000559193 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
SPG11-215ENST00000559193 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
SPG11-215ENST00000559193 EAF2Q96CJ1 260 aaPredicted RBP19.87■□□□□ 0.77
SPG11-215ENST00000559193 FAM227BQ96M60 508 aa19.87■□□□□ 0.77
SPG11-215ENST00000559193 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
SPG11-215ENST00000559193 RBM8AQ9Y5S9 174 aaKnown RBP19.87■□□□□ 0.77
SPG11-215ENST00000559193 PTMAP06454 111 aaKnown RBP19.87■□□□□ 0.77
SPG11-215ENST00000559193 CSPP1Q1MSJ5 1256 aa19.87■□□□□ 0.77
SPG11-215ENST00000559193 NMIQ13287 307 aaPredicted RBP19.86■□□□□ 0.77
SPG11-215ENST00000559193 ME3Q16798 604 aa19.86■□□□□ 0.77
SPG11-215ENST00000559193 CREB3L3Q68CJ9 461 aa19.86■□□□□ 0.77
SPG11-215ENST00000559193 TLR7Q9NYK1 1049 aaKnown RBP19.86■□□□□ 0.77
SPG11-215ENST00000559193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
SPG11-215ENST00000559193 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
SPG11-215ENST00000559193 DNM1Q05193 864 aaKnown RBP19.86■□□□□ 0.77
SPG11-215ENST00000559193 USP25Q9UHP3 1055 aa19.86■□□□□ 0.77
SPG11-215ENST00000559193 HCLS1P14317 486 aaPredicted RBP19.85■□□□□ 0.77
SPG11-215ENST00000559193 PDIA6Q15084 440 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms