RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
TRPM1-210ENST00000559179 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
TRPM1-210ENST00000559179 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRPM1-210ENST00000559179 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
TRPM1-210ENST00000559179 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
TRPM1-210ENST00000559179 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
TRPM1-210ENST00000559179 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
TRPM1-210ENST00000559179 DDNO94850 711 aaPredicted RBP16.47■□□□□ 0.23
TRPM1-210ENST00000559179 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
TRPM1-210ENST00000559179 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
TRPM1-210ENST00000559179 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
TRPM1-210ENST00000559179 POTECB2RU33 542 aa16.46■□□□□ 0.23
TRPM1-210ENST00000559179 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
TRPM1-210ENST00000559179 SRGNP10124 158 aa16.46■□□□□ 0.23
TRPM1-210ENST00000559179 MCM10Q7L590 875 aa16.46■□□□□ 0.23
TRPM1-210ENST00000559179 NEFMP07197 916 aa16.45■□□□□ 0.22
TRPM1-210ENST00000559179 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
TRPM1-210ENST00000559179 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
TRPM1-210ENST00000559179 NIP7Q9Y221 180 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRPM1-210ENST00000559179 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
TRPM1-210ENST00000559179 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
TRPM1-210ENST00000559179 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
TRPM1-210ENST00000559179 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 CCDC93Q567U6 631 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 CLEC4GQ6UXB4 293 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
TRPM1-210ENST00000559179 COL11A2P13942 1736 aaPredicted RBP16.44■□□□□ 0.22
TRPM1-210ENST00000559179 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
TRPM1-210ENST00000559179 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
TRPM1-210ENST00000559179 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
TRPM1-210ENST00000559179 NPR1P16066 1061 aa16.43■□□□□ 0.22
TRPM1-210ENST00000559179 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
TRPM1-210ENST00000559179 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
TRPM1-210ENST00000559179 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
TRPM1-210ENST00000559179 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
TRPM1-210ENST00000559179 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
TRPM1-210ENST00000559179 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
TRPM1-210ENST00000559179 POTEJP0CG39 1038 aa16.4■□□□□ 0.22
TRPM1-210ENST00000559179 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRPM1-210ENST00000559179 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
TRPM1-210ENST00000559179 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
TRPM1-210ENST00000559179 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
TRPM1-210ENST00000559179 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
TRPM1-210ENST00000559179 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
TRPM1-210ENST00000559179 LDHDQ86WU2 507 aa16.39■□□□□ 0.21
TRPM1-210ENST00000559179 MIS18AQ9NYP9 233 aa16.39■□□□□ 0.21
TRPM1-210ENST00000559179 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
TRPM1-210ENST00000559179 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
TRPM1-210ENST00000559179 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
TRPM1-210ENST00000559179 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
TRPM1-210ENST00000559179 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
TRPM1-210ENST00000559179 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
TRPM1-210ENST00000559179 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
TRPM1-210ENST00000559179 JDP2Q8WYK2 163 aa16.37■□□□□ 0.21
TRPM1-210ENST00000559179 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
TRPM1-210ENST00000559179 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 HLFQ16534 295 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
TRPM1-210ENST00000559179 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
TRPM1-210ENST00000559179 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
TRPM1-210ENST00000559179 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
TRPM1-210ENST00000559179 EPHX2P34913 555 aa16.35■□□□□ 0.21
TRPM1-210ENST00000559179 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
TRPM1-210ENST00000559179 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
TRPM1-210ENST00000559179 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
TRPM1-210ENST00000559179 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
TRPM1-210ENST00000559179 ZNF541Q9H0D2 1346 aa16.35■□□□□ 0.21
TRPM1-210ENST00000559179 SCN4AP35499 1836 aa16.34■□□□□ 0.21
TRPM1-210ENST00000559179 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
TRPM1-210ENST00000559179 MYL6BP14649 208 aa16.34■□□□□ 0.21
TRPM1-210ENST00000559179 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
TRPM1-210ENST00000559179 PNMA8AQ86V59 439 aaPredicted RBP16.34■□□□□ 0.21
TRPM1-210ENST00000559179 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
TRPM1-210ENST00000559179 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
TRPM1-210ENST00000559179 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
TRPM1-210ENST00000559179 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
TRPM1-210ENST00000559179 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
TRPM1-210ENST00000559179 RGL2O15211 777 aa16.32■□□□□ 0.2
TRPM1-210ENST00000559179 GPTP24298 496 aa16.32■□□□□ 0.2
TRPM1-210ENST00000559179 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
TRPM1-210ENST00000559179 ABT1Q9ULW3 272 aaKnown RBP16.32■□□□□ 0.2
TRPM1-210ENST00000559179 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
TRPM1-210ENST00000559179 FOXN1O15353 648 aa16.31■□□□□ 0.2
TRPM1-210ENST00000559179 MAP1SQ66K74 1059 aaPredicted RBP16.31■□□□□ 0.2
TRPM1-210ENST00000559179 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
TRPM1-210ENST00000559179 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
TRPM1-210ENST00000559179 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
TRPM1-210ENST00000559179 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 VEGFBP49765 207 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 DEFB115Q30KQ5 88 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 GPC2Q8N158 579 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms