RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ZBTB7AO95365 584 aa8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 C1orf141Q5JVX7 400 aa8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 SMARCC1Q92922 1105 aaPredicted RBP8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 SPON1Q9HCB6 807 aa8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 MRC1P22897 1456 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 PNPLA7Q6ZV29 1317 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 MAP3K7O43318 606 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 DDX10Q13206 875 aaKnown RBP8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 MTHFSDQ2M296 383 aaKnown RBP8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 CFAP53Q96M91 514 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
CTDSPL2-204ENST00000558966 UBR3Q6ZT12 1888 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 PHF14O94880 888 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 SIK1P57059 783 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 ZNF831Q5JPB2 1677 aa8.07□□□□□ -1.12
CTDSPL2-204ENST00000558966 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 CABP4P57796 275 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 PARP9Q8IXQ6 854 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 MTFR1LQ9H019 292 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 RSPH6AQ9H0K4 717 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 TFCP2L1Q9NZI6 479 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 COL5A3P25940 1745 aaPredicted RBP8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 ITPK1Q13572 414 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 AMHR2Q16671 573 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 TSR1Q2NL82 804 aaKnown RBP8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 LINC00116Q8NCU8 138 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 LGR6Q9HBX8 967 aa8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 NPDC1Q9NQX5 325 aaPredicted RBP8.06□□□□□ -1.12
CTDSPL2-204ENST00000558966 RNMTO43148 476 aaKnown RBP8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 PRKAR2BP31323 418 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 PHACTR3Q96KR7 559 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 EPAS1Q99814 870 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 NUDCQ9Y266 331 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 CICQ96RK0 1608 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 TJP1Q07157 1748 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 MAP3K5Q99683 1374 aa8.05□□□□□ -1.12
CTDSPL2-204ENST00000558966 SIPA1L3O60292 1781 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 SLC52A2Q9HAB3 445 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 ATP6V1AP38606 617 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 TTLL12Q14166 644 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 RALBP1Q15311 655 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 SMIM5Q71RC9 77 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 SLAIN1Q8ND83 568 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 GAS2L2Q8NHY3 880 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 SLC16A10Q8TF71 515 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 PPP1R1BQ9UD71 204 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 UBR2Q8IWV8 1755 aa8.04□□□□□ -1.12
CTDSPL2-204ENST00000558966 KCPQ6ZWJ8 1503 aa8.03□□□□□ -1.12
CTDSPL2-204ENST00000558966 CEMIPQ8WUJ3 1361 aa8.03□□□□□ -1.12
CTDSPL2-204ENST00000558966 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 PTCD1O75127 700 aaKnown RBP8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 POTEJP0CG39 1038 aa8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 HMGB2P26583 209 aaKnown RBP8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 TYW1BQ6NUM6 668 aa8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 IL17REQ8NFR9 667 aa8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.124e-7■■■■□ 20.7
CTDSPL2-204ENST00000558966 DAXXQ9UER7 740 aaPredicted RBP8.02□□□□□ -1.12
CTDSPL2-204ENST00000558966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-204ENST00000558966 SLC39A6Q13433 755 aa8.02□□□□□ -1.13
CTDSPL2-204ENST00000558966 DLG5Q8TDM6 1919 aa8.02□□□□□ -1.13
CTDSPL2-204ENST00000558966 MYBBP1AQ9BQG0 1328 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-204ENST00000558966 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
CTDSPL2-204ENST00000558966 C4AP0C0L4 1744 aa8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 SSFA2P28290 1259 aa8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 FLAD1Q8NFF5 587 aa8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 ARXQ96QS3 562 aa8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 PLSCR2Q9NRY7 297 aa8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 GOLGB1Q14789 3259 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-204ENST00000558966 MSL1Q68DK7 614 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 PLEKHF1Q96S99 279 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 REPIN1Q9BWE0 567 aaKnown RBP8□□□□□ -1.13
CTDSPL2-204ENST00000558966 FHDC1Q9C0D6 1143 aaPredicted RBP8□□□□□ -1.13
CTDSPL2-204ENST00000558966 UTRNP46939 3433 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 POTEB2H3BUK9 544 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 NUDT7P0C024 238 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 POLD1P28340 1107 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 TEFQ10587 303 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 FAM161AQ3B820 660 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 RC3H1Q5TC82 1133 aaKnown RBP8□□□□□ -1.13
CTDSPL2-204ENST00000558966 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
CTDSPL2-204ENST00000558966 PRKRIP1Q9H875 184 aaPredicted RBP8□□□□□ -1.13
CTDSPL2-204ENST00000558966 CRKLP46109 303 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 FOSBP53539 338 aa7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 ARSIQ5FYB1 569 aa7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 GIGYF2Q6Y7W6 1299 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 MCM10Q7L590 875 aa7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms