RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
RPL28-206ENST00000558752 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
RPL28-206ENST00000558752 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
RPL28-206ENST00000558752 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
RPL28-206ENST00000558752 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
RPL28-206ENST00000558752 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
RPL28-206ENST00000558752 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
RPL28-206ENST00000558752 TIAM2Q8IVF5 1701 aa20.26■□□□□ 0.83
RPL28-206ENST00000558752 POTECB2RU33 542 aa20.25■□□□□ 0.83
RPL28-206ENST00000558752 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
RPL28-206ENST00000558752 NBPF5PQ86XG9 351 aaPredicted RBP20.25■□□□□ 0.83
RPL28-206ENST00000558752 SIPA1L3O60292 1781 aaPredicted RBP20.25■□□□□ 0.83
RPL28-206ENST00000558752 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
RPL28-206ENST00000558752 RGL2O15211 777 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 SRGNP10124 158 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 CCDC24Q8N4L8 307 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
RPL28-206ENST00000558752 PNNQ9H307 717 aaKnown RBP20.23■□□□□ 0.83
RPL28-206ENST00000558752 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
RPL28-206ENST00000558752 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
RPL28-206ENST00000558752 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
RPL28-206ENST00000558752 NEFMP07197 916 aa20.22■□□□□ 0.83
RPL28-206ENST00000558752 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
RPL28-206ENST00000558752 FER1L6Q2WGJ9 1857 aa20.22■□□□□ 0.83
RPL28-206ENST00000558752 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
RPL28-206ENST00000558752 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
RPL28-206ENST00000558752 KCNQ3O43525 872 aa20.2■□□□□ 0.82
RPL28-206ENST00000558752 NPR1P16066 1061 aa20.2■□□□□ 0.82
RPL28-206ENST00000558752 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
RPL28-206ENST00000558752 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
RPL28-206ENST00000558752 COL11A2P13942 1736 aaPredicted RBP20.17■□□□□ 0.82
RPL28-206ENST00000558752 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
RPL28-206ENST00000558752 ALDH1B1P30837 517 aa20.17■□□□□ 0.82
RPL28-206ENST00000558752 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
RPL28-206ENST00000558752 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
RPL28-206ENST00000558752 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPL28-206ENST00000558752 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
RPL28-206ENST00000558752 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
RPL28-206ENST00000558752 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
RPL28-206ENST00000558752 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
RPL28-206ENST00000558752 MCM10Q7L590 875 aa20.16■□□□□ 0.82
RPL28-206ENST00000558752 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
RPL28-206ENST00000558752 MKRN1Q9UHC7 482 aaKnown RBP20.15■□□□□ 0.82
RPL28-206ENST00000558752 ARFGEF2Q9Y6D5 1785 aa20.15■□□□□ 0.82
RPL28-206ENST00000558752 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
RPL28-206ENST00000558752 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.81
RPL28-206ENST00000558752 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
RPL28-206ENST00000558752 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
RPL28-206ENST00000558752 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
RPL28-206ENST00000558752 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
RPL28-206ENST00000558752 L3MBTL3Q96JM7 780 aaPredicted RBP20.14■□□□□ 0.81
RPL28-206ENST00000558752 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
RPL28-206ENST00000558752 CACNA1SQ13698 1873 aa20.12■□□□□ 0.81
RPL28-206ENST00000558752 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
RPL28-206ENST00000558752 C7orf43Q8WVR3 580 aa20.12■□□□□ 0.81
RPL28-206ENST00000558752 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
RPL28-206ENST00000558752 SCN4AP35499 1836 aa20.11■□□□□ 0.81
RPL28-206ENST00000558752 FAM177BA6PVY3 158 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 NBPF26B4DH59 902 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 FOXN1O15353 648 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 NBPF10Q6P3W6 841 aaKnown RBP20.1■□□□□ 0.81
RPL28-206ENST00000558752 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
RPL28-206ENST00000558752 NBPF15Q8N660 670 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
RPL28-206ENST00000558752 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
RPL28-206ENST00000558752 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
RPL28-206ENST00000558752 KIF6Q6ZMV9 814 aa20.09■□□□□ 0.81
RPL28-206ENST00000558752 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
RPL28-206ENST00000558752 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
RPL28-206ENST00000558752 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
RPL28-206ENST00000558752 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
RPL28-206ENST00000558752 EAPPQ56P03 285 aaPredicted RBP20.07■□□□□ 0.8
RPL28-206ENST00000558752 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
RPL28-206ENST00000558752 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 MAPK8IP3Q9UPT6 1336 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 NFE2L2Q16236 605 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 HLFQ16534 295 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 RPGRQ92834 1020 aaKnown RBP20.06■□□□□ 0.8
RPL28-206ENST00000558752 PSMD1Q99460 953 aa20.06■□□□□ 0.8
RPL28-206ENST00000558752 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
RPL28-206ENST00000558752 EPHX2P34913 555 aa20.05■□□□□ 0.8
RPL28-206ENST00000558752 EIF6P56537 245 aaKnown RBP20.05■□□□□ 0.8
RPL28-206ENST00000558752 GPC2Q8N158 579 aa20.05■□□□□ 0.8
RPL28-206ENST00000558752 AIDAQ96BJ3 306 aa20.05■□□□□ 0.8
RPL28-206ENST00000558752 CNTNAP1P78357 1384 aa20.05■□□□□ 0.8
RPL28-206ENST00000558752 MAP3K15Q6ZN16 1313 aa20.04■□□□□ 0.8
RPL28-206ENST00000558752 FZD9O00144 591 aa20.04■□□□□ 0.8
RPL28-206ENST00000558752 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
RPL28-206ENST00000558752 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
RPL28-206ENST00000558752 RRP7AQ9Y3A4 280 aaKnown RBP20.04■□□□□ 0.8
RPL28-206ENST00000558752 LMOD1P29536 600 aaPredicted RBP20.03■□□□□ 0.8
RPL28-206ENST00000558752 CRY2Q49AN0 593 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 544.2 ms