RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
CASC4-205ENST00000558735 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
CASC4-205ENST00000558735 NBPF26B4DH59 902 aa15.29■□□□□ 0.04
CASC4-205ENST00000558735 PDE6BP35913 854 aa15.29■□□□□ 0.04
CASC4-205ENST00000558735 PRR5LQ6MZQ0 368 aa15.29■□□□□ 0.04
CASC4-205ENST00000558735 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
CASC4-205ENST00000558735 NPM2Q86SE8 214 aaKnown RBP15.29■□□□□ 0.04
CASC4-205ENST00000558735 DZIP3Q86Y13 1208 aaKnown RBP15.29■□□□□ 0.04
CASC4-205ENST00000558735 NBPF15Q8N660 670 aa15.29■□□□□ 0.04
CASC4-205ENST00000558735 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
CASC4-205ENST00000558735 ERFEQ4G0M1 354 aa15.28■□□□□ 0.04
CASC4-205ENST00000558735 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
CASC4-205ENST00000558735 DICER1Q9UPY3 1922 aaKnown RBP15.27■□□□□ 0.04
CASC4-205ENST00000558735 NEFMP07197 916 aa15.27■□□□□ 0.04
CASC4-205ENST00000558735 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
CASC4-205ENST00000558735 CLEC4GQ6UXB4 293 aa15.27■□□□□ 0.04
CASC4-205ENST00000558735 FER1L6Q2WGJ9 1857 aa15.27■□□□□ 0.03
CASC4-205ENST00000558735 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.03
CASC4-205ENST00000558735 CNTNAP1P78357 1384 aa15.26■□□□□ 0.03
CASC4-205ENST00000558735 C21orf2O43822 256 aa15.26■□□□□ 0.03
CASC4-205ENST00000558735 DDX10Q13206 875 aaKnown RBP15.26■□□□□ 0.03
CASC4-205ENST00000558735 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
CASC4-205ENST00000558735 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
CASC4-205ENST00000558735 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
CASC4-205ENST00000558735 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
CASC4-205ENST00000558735 RALBP1Q15311 655 aa15.25■□□□□ 0.03
CASC4-205ENST00000558735 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
CASC4-205ENST00000558735 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
CASC4-205ENST00000558735 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.031e-7■■□□□ 11.6
CASC4-205ENST00000558735 TAOK3Q9H2K8 898 aa15.25■□□□□ 0.03
CASC4-205ENST00000558735 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
CASC4-205ENST00000558735 FOXN1O15353 648 aa15.24■□□□□ 0.03
CASC4-205ENST00000558735 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
CASC4-205ENST00000558735 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
CASC4-205ENST00000558735 CNKSR1Q969H4 720 aa15.24■□□□□ 0.03
CASC4-205ENST00000558735 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
CASC4-205ENST00000558735 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 IQCA1LA6NCM1 817 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 DDNO94850 711 aaPredicted RBP15.23■□□□□ 0.03
CASC4-205ENST00000558735 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 SRGNP10124 158 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 LDHDQ86WU2 507 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 CNBD1Q8NA66 436 aa15.23■□□□□ 0.03
CASC4-205ENST00000558735 COL11A2P13942 1736 aaPredicted RBP15.23■□□□□ 0.03
CASC4-205ENST00000558735 HLFQ16534 295 aa15.22■□□□□ 0.03
CASC4-205ENST00000558735 C7orf43Q8WVR3 580 aa15.22■□□□□ 0.03
CASC4-205ENST00000558735 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
CASC4-205ENST00000558735 RGL2O15211 777 aa15.21■□□□□ 0.03
CASC4-205ENST00000558735 NPHP1O15259 732 aa15.21■□□□□ 0.03
CASC4-205ENST00000558735 ITGBL1O95965 494 aaPredicted RBP15.21■□□□□ 0.03
CASC4-205ENST00000558735 CTCFP49711 727 aaPredicted RBP15.21■□□□□ 0.03
CASC4-205ENST00000558735 ST5P78524 1137 aa15.21■□□□□ 0.03
CASC4-205ENST00000558735 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
CASC4-205ENST00000558735 NBPF5PQ86XG9 351 aaPredicted RBP15.21■□□□□ 0.03
CASC4-205ENST00000558735 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
CASC4-205ENST00000558735 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.03
CASC4-205ENST00000558735 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.03
CASC4-205ENST00000558735 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 KLRG2A4D1S0 409 aaPredicted RBP15.2■□□□□ 0.02
CASC4-205ENST00000558735 RIPK4P57078 832 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 TPTE2Q6XPS3 522 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 MASTLQ96GX5 879 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
CASC4-205ENST00000558735 SCN4AP35499 1836 aa15.2■□□□□ 0.02
CASC4-205ENST00000558735 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
CASC4-205ENST00000558735 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
CASC4-205ENST00000558735 VEGFBP49765 207 aa15.19■□□□□ 0.02
CASC4-205ENST00000558735 SLX4Q8IY92 1834 aa15.19■□□□□ 0.02
CASC4-205ENST00000558735 ARFGEF2Q9Y6D5 1785 aa15.19■□□□□ 0.02
CASC4-205ENST00000558735 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
CASC4-205ENST00000558735 ERVV-1B6SEH8 477 aa15.18■□□□□ 0.02
CASC4-205ENST00000558735 TTLL7Q6ZT98 887 aa15.18■□□□□ 0.02
CASC4-205ENST00000558735 DLG5Q8TDM6 1919 aa15.17■□□□□ 0.02
CASC4-205ENST00000558735 MYL6BP14649 208 aa15.17■□□□□ 0.02
CASC4-205ENST00000558735 AIDAQ96BJ3 306 aa15.17■□□□□ 0.02
CASC4-205ENST00000558735 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 RASSF10A6NK89 507 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 SLC34A2O95436 690 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 NPR1P16066 1061 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 CCDC93Q567U6 631 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 MAP3K15Q6ZN16 1313 aa15.16■□□□□ 0.02
CASC4-205ENST00000558735 MYBBP1AQ9BQG0 1328 aaKnown RBP15.16■□□□□ 0.02
CASC4-205ENST00000558735 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
CASC4-205ENST00000558735 PDIA6Q15084 440 aa15.15■□□□□ 0.02
CASC4-205ENST00000558735 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
CASC4-205ENST00000558735 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
CASC4-205ENST00000558735 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
CASC4-205ENST00000558735 HACL1Q9UJ83 578 aa15.15■□□□□ 0.02
CASC4-205ENST00000558735 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
CASC4-205ENST00000558735 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
CASC4-205ENST00000558735 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
CASC4-205ENST00000558735 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
CASC4-205ENST00000558735 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 FZD9O00144 591 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
CASC4-205ENST00000558735 GTF2E1P29083 439 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms