RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HYPKQ9NX55 129 aa22.42■■□□□ 1.18
TPM1-214ENST00000558544 COPS6Q7L5N1 327 aa22.41■■□□□ 1.18
TPM1-214ENST00000558544 BCL2L12Q9HB09 334 aa22.41■■□□□ 1.18
TPM1-214ENST00000558544 FKBP8Q14318 412 aa22.4■■□□□ 1.18
TPM1-214ENST00000558544 PHAXQ9H814 394 aaKnown RBP22.4■■□□□ 1.18
TPM1-214ENST00000558544 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
TPM1-214ENST00000558544 AFDNP55196 1824 aaKnown RBP22.4■■□□□ 1.18
TPM1-214ENST00000558544 MAP3K15Q6ZN16 1313 aa22.4■■□□□ 1.18
TPM1-214ENST00000558544 SLC4A2P04920 1241 aa22.39■■□□□ 1.18
TPM1-214ENST00000558544 ZBTB3Q9H5J0 574 aa22.39■■□□□ 1.18
TPM1-214ENST00000558544 NLGN1Q8N2Q7 840 aa22.38■■□□□ 1.17
TPM1-214ENST00000558544 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
TPM1-214ENST00000558544 HLFQ16534 295 aa22.38■■□□□ 1.17
TPM1-214ENST00000558544 SRCAPQ6ZRS2 3230 aa22.37■■□□□ 1.17
TPM1-214ENST00000558544 PTGER2P43116 358 aa22.37■■□□□ 1.17
TPM1-214ENST00000558544 G2E3Q7L622 706 aa22.37■■□□□ 1.17
TPM1-214ENST00000558544 POLD1P28340 1107 aa22.36■■□□□ 1.17
TPM1-214ENST00000558544 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
TPM1-214ENST00000558544 ZNF652Q9Y2D9 606 aa22.36■■□□□ 1.17
TPM1-214ENST00000558544 ERVV-1B6SEH8 477 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 MMP10P09238 476 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 TBC1D9BQ66K14 1250 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 SSH1Q8WYL5 1049 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
TPM1-214ENST00000558544 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
TPM1-214ENST00000558544 NFIXQ14938 502 aa22.34■■□□□ 1.17
TPM1-214ENST00000558544 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
TPM1-214ENST00000558544 FLIIQ13045 1269 aa22.33■■□□□ 1.17
TPM1-214ENST00000558544 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
TPM1-214ENST00000558544 ANKRD13DQ6ZTN6 518 aa22.33■■□□□ 1.17
TPM1-214ENST00000558544 PLBD2Q8NHP8 589 aa22.33■■□□□ 1.17
TPM1-214ENST00000558544 RGL2O15211 777 aa22.32■■□□□ 1.16
TPM1-214ENST00000558544 TM4SF1P30408 202 aa22.32■■□□□ 1.16
TPM1-214ENST00000558544 DDR1Q08345 913 aa22.32■■□□□ 1.16
TPM1-214ENST00000558544 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
TPM1-214ENST00000558544 MRPL50Q8N5N7 158 aaKnown RBP22.32■■□□□ 1.16
TPM1-214ENST00000558544 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
TPM1-214ENST00000558544 ATP10DQ9P241 1426 aa22.32■■□□□ 1.16
TPM1-214ENST00000558544 DDX58O95786 925 aaKnown RBP22.31■■□□□ 1.16
TPM1-214ENST00000558544 RIC3Q7Z5B4 369 aa22.31■■□□□ 1.16
TPM1-214ENST00000558544 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
TPM1-214ENST00000558544 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
TPM1-214ENST00000558544 FKBP5Q13451 457 aaPredicted RBP22.3■■□□□ 1.16
TPM1-214ENST00000558544 NIP7Q9Y221 180 aaKnown RBP eCLIP22.3■■□□□ 1.16
TPM1-214ENST00000558544 PARP3Q9Y6F1 533 aa22.3■■□□□ 1.16
TPM1-214ENST00000558544 KIF13BQ9NQT8 1826 aa22.3■■□□□ 1.16
TPM1-214ENST00000558544 ADCY9O60503 1353 aa22.3■■□□□ 1.16
TPM1-214ENST00000558544 CARMIL3Q8ND23 1372 aa22.3■■□□□ 1.16
TPM1-214ENST00000558544 GPTP24298 496 aa22.29■■□□□ 1.16
TPM1-214ENST00000558544 SETDB2Q96T68 719 aa22.29■■□□□ 1.16
TPM1-214ENST00000558544 PPP1R1BQ9UD71 204 aaPredicted RBP22.28■■□□□ 1.16
TPM1-214ENST00000558544 PI4KAP2A4QPH2 592 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 KSR2Q6VAB6 950 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 PI4KAP1Q8N8J0 262 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 MAP3K2Q9Y2U5 619 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 UBN2Q6ZU65 1347 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 ANKRD31Q8N7Z5 1873 aa22.27■■□□□ 1.16
TPM1-214ENST00000558544 SERPINB2P05120 415 aa22.26■■□□□ 1.15
TPM1-214ENST00000558544 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
TPM1-214ENST00000558544 ZNF34Q8IZ26 560 aa22.26■■□□□ 1.15
TPM1-214ENST00000558544 FAM177BA6PVY3 158 aa22.25■■□□□ 1.15
TPM1-214ENST00000558544 MYD88Q99836 296 aa22.25■■□□□ 1.15
TPM1-214ENST00000558544 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
TPM1-214ENST00000558544 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
TPM1-214ENST00000558544 F6X3S4 739 aa22.24■■□□□ 1.15
TPM1-214ENST00000558544 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
TPM1-214ENST00000558544 BCAR3O75815 825 aa22.24■■□□□ 1.15
TPM1-214ENST00000558544 METTL22Q9BUU2 404 aaPredicted RBP22.24■■□□□ 1.15
TPM1-214ENST00000558544 C10orf71Q711Q0 1435 aa22.24■■□□□ 1.15
TPM1-214ENST00000558544 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
TPM1-214ENST00000558544 PTPRCP08575 1304 aa22.23■■□□□ 1.15
TPM1-214ENST00000558544 NBPF5PQ86XG9 351 aaPredicted RBP22.23■■□□□ 1.15
TPM1-214ENST00000558544 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
TPM1-214ENST00000558544 ISCA1Q9BUE6 129 aa22.23■■□□□ 1.15
TPM1-214ENST00000558544 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
TPM1-214ENST00000558544 BRPF1P55201 1214 aaPredicted RBP22.22■■□□□ 1.15
TPM1-214ENST00000558544 PARP10Q53GL7 1025 aa22.22■■□□□ 1.15
TPM1-214ENST00000558544 SUSD4Q5VX71 490 aa22.22■■□□□ 1.15
TPM1-214ENST00000558544 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
TPM1-214ENST00000558544 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
TPM1-214ENST00000558544 NPHP1O15259 732 aa22.21■■□□□ 1.15
TPM1-214ENST00000558544 PRR5LQ6MZQ0 368 aa22.21■■□□□ 1.15
TPM1-214ENST00000558544 CCDC24Q8N4L8 307 aa22.21■■□□□ 1.15
TPM1-214ENST00000558544 CNBD1Q8NA66 436 aa22.21■■□□□ 1.15
TPM1-214ENST00000558544 LAMB2P55268 1798 aa22.21■■□□□ 1.15
TPM1-214ENST00000558544 DDX60Q8IY21 1712 aaKnown RBP22.21■■□□□ 1.15
TPM1-214ENST00000558544 TNRC6CQ9HCJ0 1690 aaKnown RBP22.21■■□□□ 1.15
TPM1-214ENST00000558544 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
TPM1-214ENST00000558544 NEXNQ0ZGT2 675 aa22.2■■□□□ 1.14
TPM1-214ENST00000558544 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
TPM1-214ENST00000558544 COL11A2P13942 1736 aaPredicted RBP22.19■■□□□ 1.14
TPM1-214ENST00000558544 NTSR2O95665 410 aa22.19■■□□□ 1.14
TPM1-214ENST00000558544 PPP1R42Q7Z4L9 355 aa22.19■■□□□ 1.14
TPM1-214ENST00000558544 NYXQ9GZU5 481 aa22.19■■□□□ 1.14
TPM1-214ENST00000558544 DLEC1Q9Y238 1755 aa22.19■■□□□ 1.14
TPM1-214ENST00000558544 IGKV5-2P06315 115 aa22.18■■□□□ 1.14
TPM1-214ENST00000558544 TPTE2Q6XPS3 522 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms