RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 STYK1Q6J9G0 422 aa21.27■■□□□ 1
SCFD1-224ENST00000557713 KLRG1Q96E93 195 aa21.27■■□□□ 1
SCFD1-224ENST00000557713 BCORQ6W2J9 1755 aa21.27■■□□□ 1
SCFD1-224ENST00000557713 POTECB2RU33 542 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 ST5P78524 1137 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
SCFD1-224ENST00000557713 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 TIAM2Q8IVF5 1701 aa21.26■□□□□ 0.99
SCFD1-224ENST00000557713 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
SCFD1-224ENST00000557713 LTBP3Q9NS15 1303 aa21.25■□□□□ 0.99
SCFD1-224ENST00000557713 FER1L6Q2WGJ9 1857 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 RGL2O15211 777 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 NPHP1O15259 732 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 JMYQ8N9B5 988 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 MASTLQ96GX5 879 aa21.24■□□□□ 0.99
SCFD1-224ENST00000557713 ERFEQ4G0M1 354 aa21.23■□□□□ 0.99
SCFD1-224ENST00000557713 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
SCFD1-224ENST00000557713 ZNF652Q9Y2D9 606 aa21.23■□□□□ 0.99
SCFD1-224ENST00000557713 NBPF5PQ86XG9 351 aaPredicted RBP21.22■□□□□ 0.99
SCFD1-224ENST00000557713 TAOK3Q9H2K8 898 aa21.22■□□□□ 0.99
SCFD1-224ENST00000557713 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
SCFD1-224ENST00000557713 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
SCFD1-224ENST00000557713 KLRG2A4D1S0 409 aaPredicted RBP21.21■□□□□ 0.99
SCFD1-224ENST00000557713 C7orf43Q8WVR3 580 aa21.21■□□□□ 0.99
SCFD1-224ENST00000557713 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
SCFD1-224ENST00000557713 SOGA3Q5TF21 947 aa21.2■□□□□ 0.98
SCFD1-224ENST00000557713 TPTE2Q6XPS3 522 aa21.2■□□□□ 0.98
SCFD1-224ENST00000557713 NIP7Q9Y221 180 aaKnown RBP eCLIP21.2■□□□□ 0.98
SCFD1-224ENST00000557713 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
SCFD1-224ENST00000557713 NPR1P16066 1061 aa21.18■□□□□ 0.98
SCFD1-224ENST00000557713 HLFQ16534 295 aa21.18■□□□□ 0.98
SCFD1-224ENST00000557713 PLEKHF1Q96S99 279 aa21.18■□□□□ 0.98
SCFD1-224ENST00000557713 PNISRQ8TF01 805 aaKnown RBP21.16■□□□□ 0.98
SCFD1-224ENST00000557713 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
SCFD1-224ENST00000557713 DDNO94850 711 aaPredicted RBP21.15■□□□□ 0.98
SCFD1-224ENST00000557713 NEFMP07197 916 aa21.15■□□□□ 0.98
SCFD1-224ENST00000557713 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
SCFD1-224ENST00000557713 EIF4A1P60842 406 aaKnown RBP21.14■□□□□ 0.97
SCFD1-224ENST00000557713 NFE2L2Q16236 605 aa21.14■□□□□ 0.97
SCFD1-224ENST00000557713 CCDC93Q567U6 631 aa21.14■□□□□ 0.97
SCFD1-224ENST00000557713 ERVV-1B6SEH8 477 aa21.13■□□□□ 0.97
SCFD1-224ENST00000557713 DLG5Q8TDM6 1919 aa21.13■□□□□ 0.97
SCFD1-224ENST00000557713 LAMB4A4D0S4 1761 aa21.13■□□□□ 0.97
SCFD1-224ENST00000557713 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
SCFD1-224ENST00000557713 FKBP4Q02790 459 aaKnown RBP eCLIP21.12■□□□□ 0.97
SCFD1-224ENST00000557713 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
SCFD1-224ENST00000557713 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
SCFD1-224ENST00000557713 CHADLQ6NUI6 762 aa21.11■□□□□ 0.97
SCFD1-224ENST00000557713 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
SCFD1-224ENST00000557713 THUMPD2Q9BTF0 503 aaKnown RBP21.11■□□□□ 0.97
SCFD1-224ENST00000557713 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
SCFD1-224ENST00000557713 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
SCFD1-224ENST00000557713 GTF2E1P29083 439 aaPredicted RBP21.1■□□□□ 0.97
SCFD1-224ENST00000557713 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
SCFD1-224ENST00000557713 RTKN2Q8IZC4 609 aa21.1■□□□□ 0.97
SCFD1-224ENST00000557713 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
SCFD1-224ENST00000557713 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
SCFD1-224ENST00000557713 CRY2Q49AN0 593 aa21.09■□□□□ 0.97
SCFD1-224ENST00000557713 COL13A1Q5TAT6 717 aaPredicted RBP21.09■□□□□ 0.97
SCFD1-224ENST00000557713 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
SCFD1-224ENST00000557713 NYXQ9GZU5 481 aa21.09■□□□□ 0.97
SCFD1-224ENST00000557713 PNNQ9H307 717 aaKnown RBP21.09■□□□□ 0.97
SCFD1-224ENST00000557713 ZNF277Q9NRM2 450 aaPredicted RBP21.09■□□□□ 0.97
SCFD1-224ENST00000557713 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
SCFD1-224ENST00000557713 MYL6BP14649 208 aa21.07■□□□□ 0.96
SCFD1-224ENST00000557713 NUTM1Q86Y26 1132 aa21.07■□□□□ 0.96
SCFD1-224ENST00000557713 KIF6Q6ZMV9 814 aa21.06■□□□□ 0.96
SCFD1-224ENST00000557713 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
SCFD1-224ENST00000557713 TAF1DQ9H5J8 278 aaPredicted RBP21.06■□□□□ 0.96
SCFD1-224ENST00000557713 ABCC12Q96J65 1359 aa21.06■□□□□ 0.96
SCFD1-224ENST00000557713 NUP98P52948 1817 aa21.06■□□□□ 0.96
SCFD1-224ENST00000557713 ZNF541Q9H0D2 1346 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 SNED1Q8TER0 1413 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 PCNTO95613 3336 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 ZNF34Q8IZ26 560 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 ZBTB3Q9H5J0 574 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 CREBZFQ9NS37 354 aa21.05■□□□□ 0.96
SCFD1-224ENST00000557713 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 FZD9O00144 591 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 GPTP24298 496 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
SCFD1-224ENST00000557713 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
SCFD1-224ENST00000557713 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 IBTKQ9P2D0 1353 aaPredicted RBP21.04■□□□□ 0.96
SCFD1-224ENST00000557713 SCN4AP35499 1836 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 RIC1Q4ADV7 1423 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 ERBB4Q15303 1308 aa21.04■□□□□ 0.96
SCFD1-224ENST00000557713 GIGYF2Q6Y7W6 1299 aaKnown RBP21.03■□□□□ 0.96
SCFD1-224ENST00000557713 LDHDQ86WU2 507 aa21.03■□□□□ 0.96
SCFD1-224ENST00000557713 PSMD1Q99460 953 aa21.03■□□□□ 0.96
SCFD1-224ENST00000557713 PASKQ96RG2 1323 aa21.03■□□□□ 0.96
SCFD1-224ENST00000557713 PDIA6Q15084 440 aa21.02■□□□□ 0.96
SCFD1-224ENST00000557713 CC2D2BQ6DHV5 1058 aa21.02■□□□□ 0.96
SCFD1-224ENST00000557713 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
SCFD1-224ENST00000557713 NTSR2O95665 410 aa21.01■□□□□ 0.95
SCFD1-224ENST00000557713 HSPA1AP0DMV8 641 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms