RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SETDB2Q96T68 719 aa24.8■■□□□ 1.56
ABCD4-228ENST00000557588 IQCA1LA6NCM1 817 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 GAS2L2Q8NHY3 880 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 MASTLQ96GX5 879 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 FMNL2Q96PY5 1086 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 ADAMTSL1Q8N6G6 1762 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 CEMIPQ8WUJ3 1361 aa24.79■■□□□ 1.56
ABCD4-228ENST00000557588 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
ABCD4-228ENST00000557588 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
ABCD4-228ENST00000557588 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
ABCD4-228ENST00000557588 NPHP1O15259 732 aa24.76■■□□□ 1.55
ABCD4-228ENST00000557588 FOXN1O15353 648 aa24.76■■□□□ 1.55
ABCD4-228ENST00000557588 A1BGP04217 495 aa24.76■■□□□ 1.55
ABCD4-228ENST00000557588 PER1O15534 1290 aaPredicted RBP24.75■■□□□ 1.55
ABCD4-228ENST00000557588 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
ABCD4-228ENST00000557588 C7orf43Q8WVR3 580 aa24.75■■□□□ 1.55
ABCD4-228ENST00000557588 TAF1DQ9H5J8 278 aaPredicted RBP24.75■■□□□ 1.55
ABCD4-228ENST00000557588 PRDM10Q9NQV6 1147 aa24.75■■□□□ 1.55
ABCD4-228ENST00000557588 CCDC93Q567U6 631 aa24.74■■□□□ 1.55
ABCD4-228ENST00000557588 DZIP3Q86Y13 1208 aaKnown RBP24.74■■□□□ 1.55
ABCD4-228ENST00000557588 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
ABCD4-228ENST00000557588 NPC1L1Q9UHC9 1359 aa24.71■■□□□ 1.55
ABCD4-228ENST00000557588 CC2D1BQ5T0F9 858 aaKnown RBP24.71■■□□□ 1.55
ABCD4-228ENST00000557588 CLEC4GQ6UXB4 293 aa24.71■■□□□ 1.55
ABCD4-228ENST00000557588 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
ABCD4-228ENST00000557588 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.54
ABCD4-228ENST00000557588 TMEM88BA6NKF7 163 aa24.7■■□□□ 1.54
ABCD4-228ENST00000557588 U2SURPO15042 1029 aaKnown RBP24.7■■□□□ 1.54
ABCD4-228ENST00000557588 ITGBL1O95965 494 aaPredicted RBP24.7■■□□□ 1.54
ABCD4-228ENST00000557588 FKBP4Q02790 459 aaKnown RBP eCLIP24.7■■□□□ 1.54
ABCD4-228ENST00000557588 NBPF5PQ86XG9 351 aaPredicted RBP24.7■■□□□ 1.54
ABCD4-228ENST00000557588 KCNQ3O43525 872 aa24.69■■□□□ 1.54
ABCD4-228ENST00000557588 NPR1P16066 1061 aa24.69■■□□□ 1.54
ABCD4-228ENST00000557588 CTCFP49711 727 aaPredicted RBP24.69■■□□□ 1.54
ABCD4-228ENST00000557588 VEGFBP49765 207 aa24.69■■□□□ 1.54
ABCD4-228ENST00000557588 AIDAQ96BJ3 306 aa24.69■■□□□ 1.54
ABCD4-228ENST00000557588 ZNF652Q9Y2D9 606 aa24.69■■□□□ 1.54
ABCD4-228ENST00000557588 BTBD11A6QL63 1104 aa24.68■■□□□ 1.54
ABCD4-228ENST00000557588 RGL2O15211 777 aa24.68■■□□□ 1.54
ABCD4-228ENST00000557588 HACL1Q9UJ83 578 aa24.67■■□□□ 1.54
ABCD4-228ENST00000557588 THSD7BQ9C0I4 1608 aa24.66■■□□□ 1.54
ABCD4-228ENST00000557588 ZNF277Q9NRM2 450 aaPredicted RBP24.66■■□□□ 1.54
ABCD4-228ENST00000557588 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
ABCD4-228ENST00000557588 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
ABCD4-228ENST00000557588 EPHX2P34913 555 aa24.65■■□□□ 1.54
ABCD4-228ENST00000557588 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
ABCD4-228ENST00000557588 EAPPQ56P03 285 aaPredicted RBP24.65■■□□□ 1.54
ABCD4-228ENST00000557588 WBP1LQ9NX94 342 aa24.65■■□□□ 1.54
ABCD4-228ENST00000557588 RASSF10A6NK89 507 aa24.64■■□□□ 1.54
ABCD4-228ENST00000557588 RTKN2Q8IZC4 609 aa24.64■■□□□ 1.54
ABCD4-228ENST00000557588 LAMB4A4D0S4 1761 aa24.64■■□□□ 1.53
ABCD4-228ENST00000557588 PRAMEF22A3QJZ6 481 aa24.63■■□□□ 1.53
ABCD4-228ENST00000557588 PNMA8AQ86V59 439 aaPredicted RBP24.63■■□□□ 1.53
ABCD4-228ENST00000557588 PHACTR3Q96KR7 559 aa24.63■■□□□ 1.53
ABCD4-228ENST00000557588 FZD9O00144 591 aa24.62■■□□□ 1.53
ABCD4-228ENST00000557588 SNRPA1P09661 255 aaKnown RBP24.62■■□□□ 1.53
ABCD4-228ENST00000557588 OLFM4Q6UX06 510 aa24.62■■□□□ 1.53
ABCD4-228ENST00000557588 TPTE2Q6XPS3 522 aa24.62■■□□□ 1.53
ABCD4-228ENST00000557588 RSPH6AQ9H0K4 717 aa24.62■■□□□ 1.53
ABCD4-228ENST00000557588 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
ABCD4-228ENST00000557588 PRKAR2BP31323 418 aa24.61■■□□□ 1.53
ABCD4-228ENST00000557588 IARSP41252 1262 aaKnown RBP24.61■■□□□ 1.53
ABCD4-228ENST00000557588 NIP7Q9Y221 180 aaKnown RBP eCLIP24.61■■□□□ 1.53
ABCD4-228ENST00000557588 GPC2Q8N158 579 aa24.6■■□□□ 1.53
ABCD4-228ENST00000557588 CLEC11AQ9Y240 323 aa24.6■■□□□ 1.53
ABCD4-228ENST00000557588 LTBP1Q14766 1721 aa24.59■■□□□ 1.53
ABCD4-228ENST00000557588 NBPF26B4DH59 902 aa24.59■■□□□ 1.53
ABCD4-228ENST00000557588 LBX1P52954 281 aa24.59■■□□□ 1.53
ABCD4-228ENST00000557588 NBPF10Q6P3W6 841 aaKnown RBP24.59■■□□□ 1.53
ABCD4-228ENST00000557588 CNTROBQ8N137 903 aa24.59■■□□□ 1.53
ABCD4-228ENST00000557588 NBPF15Q8N660 670 aa24.59■■□□□ 1.53
ABCD4-228ENST00000557588 ALDH1B1P30837 517 aa24.58■■□□□ 1.53
ABCD4-228ENST00000557588 MAP1SQ66K74 1059 aaPredicted RBP24.58■■□□□ 1.53
ABCD4-228ENST00000557588 PSMD1Q99460 953 aa24.58■■□□□ 1.53
ABCD4-228ENST00000557588 COL4A5P29400 1685 aa24.58■■□□□ 1.53
ABCD4-228ENST00000557588 HSPA8P11142 646 aaKnown RBP24.57■■□□□ 1.52
ABCD4-228ENST00000557588 DEFB115Q30KQ5 88 aa24.56■■□□□ 1.52
ABCD4-228ENST00000557588 CRY2Q49AN0 593 aa24.56■■□□□ 1.52
ABCD4-228ENST00000557588 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
ABCD4-228ENST00000557588 ABCC12Q96J65 1359 aa24.55■■□□□ 1.52
ABCD4-228ENST00000557588 RIC1Q4ADV7 1423 aa24.55■■□□□ 1.52
ABCD4-228ENST00000557588 WDR33Q9C0J8 1336 aaKnown RBP24.55■■□□□ 1.52
ABCD4-228ENST00000557588 MAP2K1Q02750 393 aaPredicted RBP24.54■■□□□ 1.52
ABCD4-228ENST00000557588 MCM10Q7L590 875 aa24.54■■□□□ 1.52
ABCD4-228ENST00000557588 FAM177BA6PVY3 158 aa24.53■■□□□ 1.52
ABCD4-228ENST00000557588 HLFQ16534 295 aa24.53■■□□□ 1.52
ABCD4-228ENST00000557588 JDP2Q8WYK2 163 aa24.53■■□□□ 1.52
ABCD4-228ENST00000557588 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
ABCD4-228ENST00000557588 CFAP53Q96M91 514 aa24.53■■□□□ 1.52
ABCD4-228ENST00000557588 NUP98P52948 1817 aa24.52■■□□□ 1.52
ABCD4-228ENST00000557588 CC2D2BQ6DHV5 1058 aa24.52■■□□□ 1.52
ABCD4-228ENST00000557588 ABHD8Q96I13 439 aa24.52■■□□□ 1.52
ABCD4-228ENST00000557588 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
ABCD4-228ENST00000557588 ABT1Q9ULW3 272 aaKnown RBP24.52■■□□□ 1.52
ABCD4-228ENST00000557588 IBTKQ9P2D0 1353 aaPredicted RBP24.52■■□□□ 1.52
ABCD4-228ENST00000557588 KDM3BQ7LBC6 1761 aa24.52■■□□□ 1.52
ABCD4-228ENST00000557588 TRPM7Q96QT4 1865 aa24.5■■□□□ 1.51
ABCD4-228ENST00000557588 GTF2E1P29083 439 aaPredicted RBP24.5■■□□□ 1.51
ABCD4-228ENST00000557588 EIF6P56537 245 aaKnown RBP24.5■■□□□ 1.51
ABCD4-228ENST00000557588 CNGB1Q14028 1251 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms