RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TAOK3Q9H2K8 898 aa22.84■■□□□ 1.25
NEDD1-210ENST00000557400 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.25
NEDD1-210ENST00000557400 PRPF40BQ6NWY9 871 aaKnown RBP22.83■■□□□ 1.25
NEDD1-210ENST00000557400 CLEC4GQ6UXB4 293 aa22.83■■□□□ 1.25
NEDD1-210ENST00000557400 MCM10Q7L590 875 aa22.83■■□□□ 1.25
NEDD1-210ENST00000557400 TIAM2Q8IVF5 1701 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 PRAMEF22A3QJZ6 481 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 POTECB2RU33 542 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 SOGA3Q5TF21 947 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 MASTLQ96GX5 879 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 ZNF652Q9Y2D9 606 aa22.82■■□□□ 1.24
NEDD1-210ENST00000557400 COL11A2P13942 1736 aaPredicted RBP22.82■■□□□ 1.24
NEDD1-210ENST00000557400 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
NEDD1-210ENST00000557400 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
NEDD1-210ENST00000557400 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
NEDD1-210ENST00000557400 RGL2O15211 777 aa22.78■■□□□ 1.24
NEDD1-210ENST00000557400 BCORQ6W2J9 1755 aa22.78■■□□□ 1.24
NEDD1-210ENST00000557400 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
NEDD1-210ENST00000557400 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
NEDD1-210ENST00000557400 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
NEDD1-210ENST00000557400 NPR1P16066 1061 aa22.76■■□□□ 1.23
NEDD1-210ENST00000557400 C7orf43Q8WVR3 580 aa22.76■■□□□ 1.23
NEDD1-210ENST00000557400 NIP7Q9Y221 180 aaKnown RBP eCLIP22.76■■□□□ 1.23
NEDD1-210ENST00000557400 DDNO94850 711 aaPredicted RBP22.75■■□□□ 1.23
NEDD1-210ENST00000557400 TAF7Q15545 349 aaPredicted RBP22.75■■□□□ 1.23
NEDD1-210ENST00000557400 CCDC93Q567U6 631 aa22.75■■□□□ 1.23
NEDD1-210ENST00000557400 COL13A1Q5TAT6 717 aaPredicted RBP22.75■■□□□ 1.23
NEDD1-210ENST00000557400 TPTE2Q6XPS3 522 aa22.75■■□□□ 1.23
NEDD1-210ENST00000557400 FER1L6Q2WGJ9 1857 aa22.75■■□□□ 1.23
NEDD1-210ENST00000557400 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
NEDD1-210ENST00000557400 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
NEDD1-210ENST00000557400 SLX4Q8IY92 1834 aa22.72■■□□□ 1.23
NEDD1-210ENST00000557400 IQCA1LA6NCM1 817 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 FAM177BA6PVY3 158 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 NEFMP07197 916 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 FKBP4Q02790 459 aaKnown RBP eCLIP22.7■■□□□ 1.22
NEDD1-210ENST00000557400 HLFQ16534 295 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 CCDC88AQ3V6T2 1871 aa22.7■■□□□ 1.22
NEDD1-210ENST00000557400 POTEIP0CG38 1075 aa22.69■■□□□ 1.22
NEDD1-210ENST00000557400 POTEJP0CG39 1038 aa22.69■■□□□ 1.22
NEDD1-210ENST00000557400 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
NEDD1-210ENST00000557400 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
NEDD1-210ENST00000557400 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
NEDD1-210ENST00000557400 L3MBTL3Q96JM7 780 aaPredicted RBP22.69■■□□□ 1.22
NEDD1-210ENST00000557400 GTF2E1P29083 439 aaPredicted RBP22.68■■□□□ 1.22
NEDD1-210ENST00000557400 RTKN2Q8IZC4 609 aa22.68■■□□□ 1.22
NEDD1-210ENST00000557400 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
NEDD1-210ENST00000557400 ARFGEF2Q9Y6D5 1785 aa22.68■■□□□ 1.22
NEDD1-210ENST00000557400 DICER1Q9UPY3 1922 aaKnown RBP22.67■■□□□ 1.22
NEDD1-210ENST00000557400 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
NEDD1-210ENST00000557400 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
NEDD1-210ENST00000557400 OLFM4Q6UX06 510 aa22.66■■□□□ 1.22
NEDD1-210ENST00000557400 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
NEDD1-210ENST00000557400 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
NEDD1-210ENST00000557400 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
NEDD1-210ENST00000557400 PCNTO95613 3336 aa22.66■■□□□ 1.22
NEDD1-210ENST00000557400 ERVV-1B6SEH8 477 aa22.65■■□□□ 1.22
NEDD1-210ENST00000557400 NYXQ9GZU5 481 aa22.65■■□□□ 1.22
NEDD1-210ENST00000557400 ZNF541Q9H0D2 1346 aa22.64■■□□□ 1.22
NEDD1-210ENST00000557400 CRY2Q49AN0 593 aa22.64■■□□□ 1.21
NEDD1-210ENST00000557400 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
NEDD1-210ENST00000557400 ABCC12Q96J65 1359 aa22.63■■□□□ 1.21
NEDD1-210ENST00000557400 MAP3K15Q6ZN16 1313 aa22.63■■□□□ 1.21
NEDD1-210ENST00000557400 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
NEDD1-210ENST00000557400 NFE2L2Q16236 605 aa22.63■■□□□ 1.21
NEDD1-210ENST00000557400 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
NEDD1-210ENST00000557400 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
NEDD1-210ENST00000557400 KIF6Q6ZMV9 814 aa22.62■■□□□ 1.21
NEDD1-210ENST00000557400 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
NEDD1-210ENST00000557400 MKRN1Q9UHC7 482 aaKnown RBP22.62■■□□□ 1.21
NEDD1-210ENST00000557400 RRP7AQ9Y3A4 280 aaKnown RBP22.62■■□□□ 1.21
NEDD1-210ENST00000557400 CACNA1SQ13698 1873 aa22.61■■□□□ 1.21
NEDD1-210ENST00000557400 TTLL7Q6ZT98 887 aa22.61■■□□□ 1.21
NEDD1-210ENST00000557400 SYNE4Q8N205 404 aa22.61■■□□□ 1.21
NEDD1-210ENST00000557400 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
NEDD1-210ENST00000557400 HACL1Q9UJ83 578 aa22.61■■□□□ 1.21
NEDD1-210ENST00000557400 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
NEDD1-210ENST00000557400 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
NEDD1-210ENST00000557400 FZD9O00144 591 aa22.6■■□□□ 1.21
NEDD1-210ENST00000557400 EAPPQ56P03 285 aaPredicted RBP22.6■■□□□ 1.21
NEDD1-210ENST00000557400 PSMD1Q99460 953 aa22.6■■□□□ 1.21
NEDD1-210ENST00000557400 IBTKQ9P2D0 1353 aaPredicted RBP22.6■■□□□ 1.21
NEDD1-210ENST00000557400 SNED1Q8TER0 1413 aa22.59■■□□□ 1.21
NEDD1-210ENST00000557400 MYL6BP14649 208 aa22.59■■□□□ 1.21
NEDD1-210ENST00000557400 CC2D2BQ6DHV5 1058 aa22.59■■□□□ 1.21
NEDD1-210ENST00000557400 UBN2Q6ZU65 1347 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 MAPK8IP3Q9UPT6 1336 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 RIC1Q4ADV7 1423 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 GPTP24298 496 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 EPHX2P34913 555 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 RPGRQ92834 1020 aaKnown RBP22.58■■□□□ 1.21
NEDD1-210ENST00000557400 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.21
NEDD1-210ENST00000557400 ZBTB3Q9H5J0 574 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 CNTNAP1P78357 1384 aa22.58■■□□□ 1.21
NEDD1-210ENST00000557400 CAPN15O75808 1086 aa22.57■■□□□ 1.2
NEDD1-210ENST00000557400 ITGBL1O95965 494 aaPredicted RBP22.57■■□□□ 1.2
NEDD1-210ENST00000557400 HOXA10P31260 410 aaPredicted RBP22.57■■□□□ 1.2
NEDD1-210ENST00000557400 JDP2Q8WYK2 163 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms