RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
PRKCH-223ENST00000557294 HACL1Q9UJ83 578 aa24.93■■□□□ 1.58
PRKCH-223ENST00000557294 CLEC11AQ9Y240 323 aa24.93■■□□□ 1.58
PRKCH-223ENST00000557294 SCN4AP35499 1836 aa24.93■■□□□ 1.58
PRKCH-223ENST00000557294 SLX4Q8IY92 1834 aa24.93■■□□□ 1.58
PRKCH-223ENST00000557294 HEG1Q9ULI3 1381 aa24.93■■□□□ 1.58
PRKCH-223ENST00000557294 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
PRKCH-223ENST00000557294 COL11A2P13942 1736 aaPredicted RBP24.92■■□□□ 1.58
PRKCH-223ENST00000557294 HSPA8P11142 646 aaKnown RBP24.91■■□□□ 1.58
PRKCH-223ENST00000557294 MAP2K1Q02750 393 aaPredicted RBP24.91■■□□□ 1.58
PRKCH-223ENST00000557294 CCDC93Q567U6 631 aa24.91■■□□□ 1.58
PRKCH-223ENST00000557294 PNMA8AQ86V59 439 aaPredicted RBP24.91■■□□□ 1.58
PRKCH-223ENST00000557294 UBR2Q8IWV8 1755 aa24.9■■□□□ 1.58
PRKCH-223ENST00000557294 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
PRKCH-223ENST00000557294 A1BGP04217 495 aa24.89■■□□□ 1.58
PRKCH-223ENST00000557294 EPHX2P34913 555 aa24.89■■□□□ 1.58
PRKCH-223ENST00000557294 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
PRKCH-223ENST00000557294 FKBP4Q02790 459 aaKnown RBP eCLIP24.89■■□□□ 1.58
PRKCH-223ENST00000557294 FAM161AQ3B820 660 aa24.89■■□□□ 1.58
PRKCH-223ENST00000557294 WDR33Q9C0J8 1336 aaKnown RBP24.88■■□□□ 1.57
PRKCH-223ENST00000557294 TEFQ10587 303 aa24.88■■□□□ 1.57
PRKCH-223ENST00000557294 IL17REQ8NFR9 667 aa24.88■■□□□ 1.57
PRKCH-223ENST00000557294 VIRMAQ69YN4 1812 aaKnown RBP24.88■■□□□ 1.57
PRKCH-223ENST00000557294 ZNF541Q9H0D2 1346 aa24.87■■□□□ 1.57
PRKCH-223ENST00000557294 KLRG2A4D1S0 409 aaPredicted RBP24.87■■□□□ 1.57
PRKCH-223ENST00000557294 NPR1P16066 1061 aa24.87■■□□□ 1.57
PRKCH-223ENST00000557294 ZNF277Q9NRM2 450 aaPredicted RBP24.87■■□□□ 1.57
PRKCH-223ENST00000557294 SCN7AQ01118 1682 aa24.86■■□□□ 1.57
PRKCH-223ENST00000557294 DIAPH1O60610 1272 aaKnown RBP24.86■■□□□ 1.57
PRKCH-223ENST00000557294 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
PRKCH-223ENST00000557294 AMER1Q5JTC6 1135 aaPredicted RBP24.86■■□□□ 1.57
PRKCH-223ENST00000557294 MAP1SQ66K74 1059 aaPredicted RBP24.86■■□□□ 1.57
PRKCH-223ENST00000557294 CLEC4GQ6UXB4 293 aa24.86■■□□□ 1.57
PRKCH-223ENST00000557294 RTKN2Q8IZC4 609 aa24.86■■□□□ 1.57
PRKCH-223ENST00000557294 FMNL2Q96PY5 1086 aa24.86■■□□□ 1.57
PRKCH-223ENST00000557294 FZD9O00144 591 aa24.85■■□□□ 1.57
PRKCH-223ENST00000557294 NBPF5PQ86XG9 351 aaPredicted RBP24.85■■□□□ 1.57
PRKCH-223ENST00000557294 DZIP3Q86Y13 1208 aaKnown RBP24.85■■□□□ 1.57
PRKCH-223ENST00000557294 GNAT3A8MTJ3 354 aa24.84■■□□□ 1.57
PRKCH-223ENST00000557294 RGS19P49795 217 aa24.83■■□□□ 1.57
PRKCH-223ENST00000557294 ABT1Q9ULW3 272 aaKnown RBP24.83■■□□□ 1.57
PRKCH-223ENST00000557294 GPC2Q8N158 579 aa24.82■■□□□ 1.56
PRKCH-223ENST00000557294 ADAMTSL1Q8N6G6 1762 aa24.82■■□□□ 1.56
PRKCH-223ENST00000557294 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
PRKCH-223ENST00000557294 ARFGEF2Q9Y6D5 1785 aa24.81■■□□□ 1.56
PRKCH-223ENST00000557294 MLLT1Q03111 559 aaPredicted RBP24.81■■□□□ 1.56
PRKCH-223ENST00000557294 TPTE2Q6XPS3 522 aa24.81■■□□□ 1.56
PRKCH-223ENST00000557294 DDX21Q9NR30 783 aaKnown RBP eCLIP24.81■■□□□ 1.56
PRKCH-223ENST00000557294 ALDH1B1P30837 517 aa24.8■■□□□ 1.56
PRKCH-223ENST00000557294 IARSP41252 1262 aaKnown RBP24.8■■□□□ 1.56
PRKCH-223ENST00000557294 OLFM4Q6UX06 510 aa24.8■■□□□ 1.56
PRKCH-223ENST00000557294 SYNE4Q8N205 404 aa24.8■■□□□ 1.56
PRKCH-223ENST00000557294 GAS2L2Q8NHY3 880 aa24.8■■□□□ 1.56
PRKCH-223ENST00000557294 ZNF652Q9Y2D9 606 aa24.79■■□□□ 1.56
PRKCH-223ENST00000557294 USP16Q9Y5T5 823 aa24.79■■□□□ 1.56
PRKCH-223ENST00000557294 CCDC85CA6NKD9 419 aa24.78■■□□□ 1.56
PRKCH-223ENST00000557294 BEGAINQ9BUH8 593 aa24.78■■□□□ 1.56
PRKCH-223ENST00000557294 PCDH10Q9P2E7 1040 aa24.78■■□□□ 1.56
PRKCH-223ENST00000557294 CACNA1SQ13698 1873 aa24.78■■□□□ 1.56
PRKCH-223ENST00000557294 KCNQ3O43525 872 aa24.77■■□□□ 1.56
PRKCH-223ENST00000557294 BTBD11A6QL63 1104 aa24.76■■□□□ 1.55
PRKCH-223ENST00000557294 RGL2O15211 777 aa24.76■■□□□ 1.55
PRKCH-223ENST00000557294 ECE1P42892 770 aa24.76■■□□□ 1.55
PRKCH-223ENST00000557294 JDP2Q8WYK2 163 aa24.76■■□□□ 1.55
PRKCH-223ENST00000557294 CAPNS2Q96L46 248 aa24.76■■□□□ 1.55
PRKCH-223ENST00000557294 GPR101Q96P66 508 aaPredicted RBP24.75■■□□□ 1.55
PRKCH-223ENST00000557294 PSMD1Q99460 953 aa24.75■■□□□ 1.55
PRKCH-223ENST00000557294 PIP4K2AP48426 406 aaPredicted RBP24.74■■□□□ 1.55
PRKCH-223ENST00000557294 NIP7Q9Y221 180 aaKnown RBP eCLIP24.74■■□□□ 1.55
PRKCH-223ENST00000557294 CEMIPQ8WUJ3 1361 aa24.74■■□□□ 1.55
PRKCH-223ENST00000557294 EIF6P56537 245 aaKnown RBP24.72■■□□□ 1.55
PRKCH-223ENST00000557294 LMOD1P29536 600 aaPredicted RBP24.71■■□□□ 1.55
PRKCH-223ENST00000557294 CST9Q5W186 159 aa24.71■■□□□ 1.55
PRKCH-223ENST00000557294 CYP4F22Q6NT55 531 aa24.71■■□□□ 1.55
PRKCH-223ENST00000557294 PAXIP1Q6ZW49 1069 aaPredicted RBP24.71■■□□□ 1.55
PRKCH-223ENST00000557294 GJA3Q9Y6H8 435 aa24.71■■□□□ 1.55
PRKCH-223ENST00000557294 BCORQ6W2J9 1755 aa24.71■■□□□ 1.55
PRKCH-223ENST00000557294 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.54
PRKCH-223ENST00000557294 PRAMEF22A3QJZ6 481 aa24.7■■□□□ 1.54
PRKCH-223ENST00000557294 U2SURPO15042 1029 aaKnown RBP24.7■■□□□ 1.54
PRKCH-223ENST00000557294 SNRPA1P09661 255 aaKnown RBP24.7■■□□□ 1.54
PRKCH-223ENST00000557294 MAP2K2P36507 400 aa24.7■■□□□ 1.54
PRKCH-223ENST00000557294 FMR1Q06787 632 aaKnown RBP eCLIP24.7■■□□□ 1.54
PRKCH-223ENST00000557294 CC2D2BQ6DHV5 1058 aa24.7■■□□□ 1.54
PRKCH-223ENST00000557294 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.54
PRKCH-223ENST00000557294 FAM177BA6PVY3 158 aa24.69■■□□□ 1.54
PRKCH-223ENST00000557294 PER1O15534 1290 aaPredicted RBP24.69■■□□□ 1.54
PRKCH-223ENST00000557294 EPS15P42566 896 aa24.69■■□□□ 1.54
PRKCH-223ENST00000557294 USP50Q70EL3 339 aaPredicted RBP24.69■■□□□ 1.54
PRKCH-223ENST00000557294 GTF2E1P29083 439 aaPredicted RBP24.68■■□□□ 1.54
PRKCH-223ENST00000557294 SCNN1DP51172 638 aa24.68■■□□□ 1.54
PRKCH-223ENST00000557294 TLL2Q9Y6L7 1015 aa24.68■■□□□ 1.54
PRKCH-223ENST00000557294 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
PRKCH-223ENST00000557294 NBPF26B4DH59 902 aa24.67■■□□□ 1.54
PRKCH-223ENST00000557294 GRM1Q13255 1194 aa24.67■■□□□ 1.54
PRKCH-223ENST00000557294 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
PRKCH-223ENST00000557294 GRIPAP1Q4V328 841 aa24.67■■□□□ 1.54
PRKCH-223ENST00000557294 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
PRKCH-223ENST00000557294 NBPF10Q6P3W6 841 aaKnown RBP24.67■■□□□ 1.54
PRKCH-223ENST00000557294 NBPF15Q8N660 670 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms