RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 TTC12Q9H892 705 aaPredicted RBP15.06■□□□□ 0
APEX1-216ENST00000557159 KDRP35968 1356 aa15.05■□□□□ -0
APEX1-216ENST00000557159 HTATSF1O43719 755 aaKnown RBP15.05■□□□□ -0
APEX1-216ENST00000557159 AMPHP49418 695 aa15.05■□□□□ -0
APEX1-216ENST00000557159 PEAK1Q9H792 1746 aa15.05■□□□□ -0
APEX1-216ENST00000557159 NFAT5O94916 1531 aa15.05■□□□□ -0
APEX1-216ENST00000557159 ZSCAN22P10073 491 aaPredicted RBP15.04■□□□□ -0
APEX1-216ENST00000557159 HSPA4P34932 840 aa15.04■□□□□ -0
APEX1-216ENST00000557159 ARHGEF25Q86VW2 580 aa15.04■□□□□ -0
APEX1-216ENST00000557159 MEIS3Q99687 375 aa15.04■□□□□ -0
APEX1-216ENST00000557159 OGFRQ9NZT2 677 aa15.04■□□□□ -0
APEX1-216ENST00000557159 CACNA1FO60840 1977 aa15.04■□□□□ -0
APEX1-216ENST00000557159 CPDO75976 1380 aa15.04■□□□□ -0
APEX1-216ENST00000557159 PHRF1Q9P1Y6 1649 aaKnown RBP15.04■□□□□ -0
APEX1-216ENST00000557159 ZC3H6P61129 1189 aaKnown RBP15.03■□□□□ -0
APEX1-216ENST00000557159 CBX1P83916 185 aa15.03■□□□□ -0
APEX1-216ENST00000557159 GABPB1Q06547 395 aaPredicted RBP15.03■□□□□ -0
APEX1-216ENST00000557159 PALD1Q9ULE6 856 aa15.03■□□□□ -0
APEX1-216ENST00000557159 NUTM2BA6NNL0 878 aaPredicted RBP15.03■□□□□ -0
APEX1-216ENST00000557159 NUTM2EB1AL46 878 aaPredicted RBP15.03■□□□□ -0
APEX1-216ENST00000557159 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
APEX1-216ENST00000557159 NUTM2AQ8IVF1 878 aaPredicted RBP15.03■□□□□ -0
APEX1-216ENST00000557159 ABCA3Q99758 1704 aa15.03■□□□□ -0
APEX1-216ENST00000557159 FOXD4L5Q5VV16 416 aaPredicted RBP15.02■□□□□ -0
APEX1-216ENST00000557159 FOXD4L4Q8WXT5 416 aaPredicted RBP15.02■□□□□ -0
APEX1-216ENST00000557159 ZNF830Q96NB3 372 aaPredicted RBP15.02■□□□□ -0
APEX1-216ENST00000557159 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
APEX1-216ENST00000557159 IGSF1Q8N6C5 1336 aa15.02□□□□□ -0.01
APEX1-216ENST00000557159 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
APEX1-216ENST00000557159 FAM193AP78312 1265 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 AEBP1Q8IUX7 1158 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
APEX1-216ENST00000557159 LRRCC1Q9C099 1032 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 TTC14Q96N46 770 aa15.01□□□□□ -0.01
APEX1-216ENST00000557159 STX6O43752 255 aa15□□□□□ -0.01
APEX1-216ENST00000557159 F13A1P00488 732 aa15□□□□□ -0.01
APEX1-216ENST00000557159 GNAI2P04899 355 aa15□□□□□ -0.01
APEX1-216ENST00000557159 ANO2Q9NQ90 1003 aa15□□□□□ -0.01
APEX1-216ENST00000557159 PRDM11Q9NQV5 511 aa15□□□□□ -0.01
APEX1-216ENST00000557159 RGS17Q9UGC6 210 aaPredicted RBP15□□□□□ -0.01
APEX1-216ENST00000557159 LRP6O75581 1613 aa15□□□□□ -0.01
APEX1-216ENST00000557159 TSC1Q92574 1164 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 CCDC171Q6TFL3 1326 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 SMTNL1A8MU46 457 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 CCDC192P0DO97 292 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 CHRNA2Q15822 529 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.99□□□□□ -0.01
APEX1-216ENST00000557159 ARID3AQ99856 593 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 GDPD2Q9HCC8 539 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
APEX1-216ENST00000557159 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
APEX1-216ENST00000557159 RAD50Q92878 1312 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 GNAI3P08754 354 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 HOXC9P31274 260 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 FAM200AQ8TCP9 573 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
APEX1-216ENST00000557159 EYA1Q99502 592 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 CGNQ9P2M7 1197 aaKnown RBP14.98□□□□□ -0.01
APEX1-216ENST00000557159 PYCARDQ9ULZ3 195 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 CRB1P82279 1406 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
APEX1-216ENST00000557159 SYT1P21579 422 aa14.97□□□□□ -0.01
APEX1-216ENST00000557159 ATP8B2P98198 1209 aa14.97□□□□□ -0.01
APEX1-216ENST00000557159 IP6K1Q92551 441 aa14.97□□□□□ -0.01
APEX1-216ENST00000557159 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
APEX1-216ENST00000557159 LTN1O94822 1766 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 ELP1O95163 1332 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 DCTN1Q14203 1278 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 CREBRFQ8IUR6 639 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 C17orf53Q8N3J3 647 aaPredicted RBP14.96□□□□□ -0.01
APEX1-216ENST00000557159 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 NCBP1Q09161 790 aaKnown RBP14.96□□□□□ -0.01
APEX1-216ENST00000557159 MTHFSDQ2M296 383 aaKnown RBP14.96□□□□□ -0.01
APEX1-216ENST00000557159 KRT24Q2M2I5 525 aa14.96□□□□□ -0.01
APEX1-216ENST00000557159 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
APEX1-216ENST00000557159 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
APEX1-216ENST00000557159 AP5Z1O43299 807 aa14.95□□□□□ -0.02
APEX1-216ENST00000557159 MCM10Q7L590 875 aa14.95□□□□□ -0.02
APEX1-216ENST00000557159 ZSCAN31Q96LW9 406 aaPredicted RBP14.95□□□□□ -0.02
APEX1-216ENST00000557159 C8orf37Q96NL8 207 aa14.95□□□□□ -0.02
APEX1-216ENST00000557159 DDX41Q9UJV9 622 aaKnown RBP14.95□□□□□ -0.02
APEX1-216ENST00000557159 COL18A1P39060 1754 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 APBB1O00213 710 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 SGSM2O43147 1006 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 CAVIN2O95810 425 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.026e-9■□□□□ 10.7
APEX1-216ENST00000557159 FNBP4Q8N3X1 1017 aaPredicted RBP14.94□□□□□ -0.02
APEX1-216ENST00000557159 CHMP4AQ9BY43 222 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 UPF3BQ9BZI7 483 aaKnown RBP14.94□□□□□ -0.02
APEX1-216ENST00000557159 SH2B1Q9NRF2 756 aaPredicted RBP14.94□□□□□ -0.02
APEX1-216ENST00000557159 ABCC6O95255 1503 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 CAMTA1Q9Y6Y1 1673 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms