RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 L3MBTL2Q969R5 705 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 SLC30A3Q99726 388 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 WIZO95785 1651 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
SRP54-212ENST00000556992 ELOA3DA6NLF2 546 aaPredicted RBP7.18□□□□□ -1.26
SRP54-212ENST00000556992 GATA4P43694 442 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 NCOA4Q13772 614 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 ELOA3BQ3SY89 546 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 ELOA3Q8NG57 546 aa7.18□□□□□ -1.26
SRP54-212ENST00000556992 AVENQ9NQS1 362 aaPredicted RBP7.18□□□□□ -1.26
SRP54-212ENST00000556992 SCHIP1Q9P0W5 487 aaPredicted RBP7.18□□□□□ -1.26
SRP54-212ENST00000556992 MCM6Q14566 821 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 WASHC4Q2M389 1173 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 EML3Q32P44 896 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 SLC9A9Q8IVB4 645 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 ZNF232Q9UNY5 417 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 NCAPD3P42695 1498 aa7.17□□□□□ -1.26
SRP54-212ENST00000556992 SMARCA2P51531 1590 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 M0R082 166 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 SPATA31C1P0DKV0 1188 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 NOS2P35228 1153 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 FOXD4L6Q3SYB3 417 aaPredicted RBP7.16□□□□□ -1.26
SRP54-212ENST00000556992 SAMD5Q5TGI4 173 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 FOXD4L3Q6VB84 417 aaPredicted RBP7.16□□□□□ -1.26
SRP54-212ENST00000556992 ZNF417Q8TAU3 575 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 ZNF587Q96SQ5 575 aaPredicted RBP7.16□□□□□ -1.26
SRP54-212ENST00000556992 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
SRP54-212ENST00000556992 SLC24A1O60721 1099 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 ALBP02768 609 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 EPHA4P54764 986 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 COL9A3Q14050 684 aaPredicted RBP7.15□□□□□ -1.26
SRP54-212ENST00000556992 RSPO4Q2I0M5 234 aaPredicted RBP7.15□□□□□ -1.26
SRP54-212ENST00000556992 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 MDFIQ99750 246 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 KIAA1024Q9UPX6 916 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 STARD13Q9Y3M8 1113 aa7.15□□□□□ -1.26
SRP54-212ENST00000556992 BAZ1BQ9UIG0 1483 aaKnown RBP7.15□□□□□ -1.27
SRP54-212ENST00000556992 EML1O00423 815 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 BACH1O14867 736 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 ALAS2P22557 587 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 GRIK4Q16099 956 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 PSMG3-AS1Q96PY0 264 aa7.14□□□□□ -1.27
SRP54-212ENST00000556992 LOC105371045A0A1W2PR82 267 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 SOX11P35716 441 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 LAMC2Q13753 1193 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 TEAD4Q15561 434 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 RHPN1Q8TCX5 695 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 C7orf43Q8WVR3 580 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 NEUROD4Q9HD90 331 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 HCN4Q9Y3Q4 1203 aa7.13□□□□□ -1.27
SRP54-212ENST00000556992 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
SRP54-212ENST00000556992 PRRT3Q5FWE3 981 aa7.12□□□□□ -1.27
SRP54-212ENST00000556992 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
SRP54-212ENST00000556992 TPCN2Q8NHX9 752 aa7.12□□□□□ -1.27
SRP54-212ENST00000556992 TSPAN10Q9H1Z9 355 aaPredicted RBP7.12□□□□□ -1.27
SRP54-212ENST00000556992 ALG2Q9H553 416 aa7.12□□□□□ -1.27
SRP54-212ENST00000556992 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 SIN3BO75182 1162 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 APBA3O96018 575 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 ADH7P40394 386 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 ZNF280CQ8ND82 737 aa7.11□□□□□ -1.27
SRP54-212ENST00000556992 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
SRP54-212ENST00000556992 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
SRP54-212ENST00000556992 FAM9AQ8IZU1 332 aaPredicted RBP7.1□□□□□ -1.27
SRP54-212ENST00000556992 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
SRP54-212ENST00000556992 BRD7Q9NPI1 651 aa7.1□□□□□ -1.27
SRP54-212ENST00000556992 SFI1A8K8P3 1242 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 ADARB2-AS1A8MUL3 147 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 ZBTB7BO15156 539 aaPredicted RBP7.09□□□□□ -1.27
SRP54-212ENST00000556992 DYRK3O43781 588 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 NID1P14543 1247 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 CLDN10P78369 228 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 TNFRSF25Q93038 417 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 PHACTR1Q9C0D0 580 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 IGFLR1Q9H665 355 aa7.09□□□□□ -1.27
SRP54-212ENST00000556992 BHMTQ93088 406 aa7.08□□□□□ -1.28
SRP54-212ENST00000556992 SPDYE3A6NKU9 549 aa7.07□□□□□ -1.28
SRP54-212ENST00000556992 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
SRP54-212ENST00000556992 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
SRP54-212ENST00000556992 TSEN2Q8NCE0 465 aaKnown RBP7.07□□□□□ -1.28
SRP54-212ENST00000556992 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 LGR5O75473 907 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 TYRO3Q06418 890 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 PRSS36Q5K4E3 855 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 TRAPPC3LQ5T215 181 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 SHISA2Q6UWI4 295 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms