RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 KRI1Q8N9T8 703 aaKnown RBP7.31□□□□□ -1.24
ATXN3-244ENST00000556898 HPS1Q92902 700 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 NUDT16Q96DE0 195 aaKnown RBP7.31□□□□□ -1.24
ATXN3-244ENST00000556898 PANK3Q9H999 370 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 TRIM66O15016 1216 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
ATXN3-244ENST00000556898 AMHR2Q16671 573 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
ATXN3-244ENST00000556898 CABP1Q9NZU7 370 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 MYOM1P52179 1685 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 SLIT2O94813 1529 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 USP32Q8NFA0 1604 aa7.3□□□□□ -1.24
ATXN3-244ENST00000556898 ADGRB2O60241 1585 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 YY1P25490 414 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 CCDC24Q8N4L8 307 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 PMFBP1Q8TBY8 1022 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 CARD14Q9BXL6 1004 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 ATP7BP35670 1465 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 CD163L1Q9NR16 1453 aa7.29□□□□□ -1.24
ATXN3-244ENST00000556898 PPIP5K1Q6PFW1 1433 aa7.28□□□□□ -1.24
ATXN3-244ENST00000556898 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
ATXN3-244ENST00000556898 CDCA8Q53HL2 280 aa7.28□□□□□ -1.24
ATXN3-244ENST00000556898 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
ATXN3-244ENST00000556898 CABLES1Q8TDN4 633 aa7.28□□□□□ -1.24
ATXN3-244ENST00000556898 PXDNQ92626 1479 aa7.28□□□□□ -1.24
ATXN3-244ENST00000556898 FMN2Q9NZ56 1722 aa7.27□□□□□ -1.25
ATXN3-244ENST00000556898 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-244ENST00000556898 HOXA2O43364 376 aa7.27□□□□□ -1.25
ATXN3-244ENST00000556898 PTCRAQ6ISU1 281 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-244ENST00000556898 A0A1W2PP64 1363 aa7.27□□□□□ -1.25
ATXN3-244ENST00000556898 CDC42BPGQ6DT37 1551 aa7.27□□□□□ -1.25
ATXN3-244ENST00000556898 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-244ENST00000556898 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
ATXN3-244ENST00000556898 NSD3Q9BZ95 1437 aa7.26□□□□□ -1.25
ATXN3-244ENST00000556898 RGPD8O14715 1765 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-244ENST00000556898 TOPAZ1Q8N9V7 1692 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 USP46P62068 366 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
ATXN3-244ENST00000556898 CC2D1BQ5T0F9 858 aaKnown RBP7.25□□□□□ -1.25
ATXN3-244ENST00000556898 TRIM47Q96LD4 638 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 ACEP12821 1306 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 GLI3P10071 1580 aa7.25□□□□□ -1.25
ATXN3-244ENST00000556898 SBNO1A3KN83 1393 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 LRP5O75197 1615 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 ANKRD36BQ8N2N9 1353 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 WIPF1O43516 503 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 PDE4DQ08499 809 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 NBPF14Q5TI25 921 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 FAM196AQ6ZSG2 479 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.24□□□□□ -1.25
ATXN3-244ENST00000556898 PARP9Q8IXQ6 854 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 REPIN1Q9BWE0 567 aaKnown RBP7.24□□□□□ -1.25
ATXN3-244ENST00000556898 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
ATXN3-244ENST00000556898 ARHGEF10O15013 1369 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 KTN1Q86UP2 1357 aaKnown RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 EP400Q96L91 3159 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 TERTO14746 1132 aaKnown RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 SIAH2O43255 324 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 APBA3O96018 575 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 JUNDP17535 347 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 CLCN1P35523 988 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 WNT7BP56706 349 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 FAM182BQ5T319 152 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 HDGFL2Q7Z4V5 671 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 NME9Q86XW9 330 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 GPCPD1Q9NPB8 672 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 FAM217BQ9NTX9 383 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 PCDHGC3Q9UN70 934 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 CPSF1Q10570 1443 aaKnown RBP7.23□□□□□ -1.25
ATXN3-244ENST00000556898 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
ATXN3-244ENST00000556898 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 TNS3Q68CZ2 1445 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 TRIM37O94972 964 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 ALDH1A1P00352 501 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 FBLN1P23142 703 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 CCDC184Q52MB2 194 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 TERF2IPQ9NYB0 399 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-244ENST00000556898 KNSTRNQ9Y448 316 aa7.22□□□□□ -1.25
ATXN3-244ENST00000556898 POLR3AO14802 1390 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-244ENST00000556898 NINLQ9Y2I6 1382 aa7.21□□□□□ -1.25
ATXN3-244ENST00000556898 USP6P35125 1406 aa7.21□□□□□ -1.25
ATXN3-244ENST00000556898 SSH2Q76I76 1423 aa7.21□□□□□ -1.25
ATXN3-244ENST00000556898 FYB1O15117 783 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 ANP32CO43423 234 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 KCNQ2O43526 872 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 TNNT2P45379 298 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-244ENST00000556898 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-244ENST00000556898 NUTM2GQ5VZR2 741 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 PRKRIP1Q9H875 184 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-244ENST00000556898 SENP2Q9HC62 589 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATXN3-244ENST00000556898 TTC21BQ7Z4L5 1316 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms