RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 UBAP1LF5GYI3 381 aa22.57■■□□□ 1.2
SDR39U1-220ENST00000556548 RBM42Q9BTD8 480 aaKnown RBP22.57■■□□□ 1.2
SDR39U1-220ENST00000556548 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
SDR39U1-220ENST00000556548 SALL3Q9BXA9 1300 aa22.56■■□□□ 1.2
SDR39U1-220ENST00000556548 RAB11FIP3O75154 756 aa22.56■■□□□ 1.2
SDR39U1-220ENST00000556548 OSBPL3Q9H4L5 887 aa22.56■■□□□ 1.2
SDR39U1-220ENST00000556548 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
SDR39U1-220ENST00000556548 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
SDR39U1-220ENST00000556548 UTYO14607 1347 aa22.55■■□□□ 1.2
SDR39U1-220ENST00000556548 A0A0G2JS52 829 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 MTX1Q13505 466 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 BECN1Q14457 450 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 PLBD2Q8NHP8 589 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 KIF1BPQ96EK5 621 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 ZBTB3Q9H5J0 574 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
SDR39U1-220ENST00000556548 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
SDR39U1-220ENST00000556548 HDAC5Q9UQL6 1122 aa22.53■■□□□ 1.2
SDR39U1-220ENST00000556548 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
SDR39U1-220ENST00000556548 DNAJC10Q8IXB1 793 aa22.53■■□□□ 1.2
SDR39U1-220ENST00000556548 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
SDR39U1-220ENST00000556548 LAMB4A4D0S4 1761 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 KAT6BQ8WYB5 2073 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 RTL5Q5HYW3 569 aaPredicted RBP22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 UBE3BQ7Z3V4 1068 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 TRIM6-TRIM34B2RNG4 842 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 PAPPAQ13219 1627 aa22.52■■□□□ 1.2
SDR39U1-220ENST00000556548 A0A087WZG4 1122 aa22.51■■□□□ 1.19
SDR39U1-220ENST00000556548 SIL1Q9H173 461 aa22.51■■□□□ 1.19
SDR39U1-220ENST00000556548 PLCH1Q4KWH8 1693 aa22.5■■□□□ 1.19
SDR39U1-220ENST00000556548 MAP4K4O95819 1239 aaPredicted RBP22.5■■□□□ 1.19
SDR39U1-220ENST00000556548 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
SDR39U1-220ENST00000556548 HSP90AB4PQ58FF6 505 aa22.5■■□□□ 1.19
SDR39U1-220ENST00000556548 ARXQ96QS3 562 aa22.5■■□□□ 1.19
SDR39U1-220ENST00000556548 STAP2Q9UGK3 403 aa22.49■■□□□ 1.19
SDR39U1-220ENST00000556548 DDB1Q16531 1140 aa22.49■■□□□ 1.19
SDR39U1-220ENST00000556548 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
SDR39U1-220ENST00000556548 SPRYD3Q8NCJ5 442 aa22.49■■□□□ 1.19
SDR39U1-220ENST00000556548 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
SDR39U1-220ENST00000556548 ACSBG1Q96GR2 724 aa22.47■■□□□ 1.19
SDR39U1-220ENST00000556548 ARFGEF2Q9Y6D5 1785 aa22.47■■□□□ 1.19
SDR39U1-220ENST00000556548 SLC4A9Q96Q91 983 aa22.47■■□□□ 1.19
SDR39U1-220ENST00000556548 SLKQ9H2G2 1235 aaPredicted RBP22.47■■□□□ 1.19
SDR39U1-220ENST00000556548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.47■■□□□ 1.19
SDR39U1-220ENST00000556548 BCL9O00512 1426 aa22.46■■□□□ 1.19
SDR39U1-220ENST00000556548 KIF2CQ99661 725 aa22.46■■□□□ 1.19
SDR39U1-220ENST00000556548 G3BP1Q13283 466 aaKnown RBP eCLIP22.46■■□□□ 1.19
SDR39U1-220ENST00000556548 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
SDR39U1-220ENST00000556548 C8orf37Q96NL8 207 aa22.45■■□□□ 1.18
SDR39U1-220ENST00000556548 ITGB4P16144 1822 aa22.45■■□□□ 1.18
SDR39U1-220ENST00000556548 SPATA31A5Q5VU36 1347 aa22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 SPATA31A7Q8IWB4 1347 aa22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 SASH1O94885 1247 aa22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 STARD3NLO95772 234 aa22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 PI4K2BQ8TCG2 481 aa22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 THRAP3Q9Y2W1 955 aaKnown RBP22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 AFDNP55196 1824 aaKnown RBP22.44■■□□□ 1.18
SDR39U1-220ENST00000556548 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
SDR39U1-220ENST00000556548 USP26Q9BXU7 913 aa22.43■■□□□ 1.18
SDR39U1-220ENST00000556548 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
SDR39U1-220ENST00000556548 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
SDR39U1-220ENST00000556548 TEX13AQ9BXU3 409 aaPredicted RBP22.43■■□□□ 1.18
SDR39U1-220ENST00000556548 CASP7P55210 303 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 AACSQ86V21 672 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 CDCA7Q9BWT1 371 aaPredicted RBP22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 CHMP3Q9Y3E7 222 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 NRAPQ86VF7 1730 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 NGLY1Q96IV0 654 aa22.42■■□□□ 1.18
SDR39U1-220ENST00000556548 ERC2O15083 957 aa22.41■■□□□ 1.18
SDR39U1-220ENST00000556548 IFIT2P09913 472 aaKnown RBP22.41■■□□□ 1.18
SDR39U1-220ENST00000556548 CCDC8Q9H0W5 538 aaPredicted RBP22.41■■□□□ 1.18
SDR39U1-220ENST00000556548 AOX1Q06278 1338 aa22.41■■□□□ 1.18
SDR39U1-220ENST00000556548 H7C1W4 665 aa22.4■■□□□ 1.18
SDR39U1-220ENST00000556548 CHMLP26374 656 aa22.4■■□□□ 1.18
SDR39U1-220ENST00000556548 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
SDR39U1-220ENST00000556548 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
SDR39U1-220ENST00000556548 HSCBQ8IWL3 235 aa22.4■■□□□ 1.18
SDR39U1-220ENST00000556548 CYP19A1P11511 503 aaPredicted RBP22.39■■□□□ 1.17
SDR39U1-220ENST00000556548 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
SDR39U1-220ENST00000556548 EAF2Q96CJ1 260 aaPredicted RBP22.39■■□□□ 1.17
SDR39U1-220ENST00000556548 SLIT2O94813 1529 aa22.39■■□□□ 1.17
SDR39U1-220ENST00000556548 WNK3Q9BYP7 1800 aa22.39■■□□□ 1.17
SDR39U1-220ENST00000556548 REC8O95072 547 aa22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 PTPN12Q05209 780 aaKnown RBP22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 RABL6Q3YEC7 729 aaPredicted RBP22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 ESYT1Q9BSJ8 1104 aa22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 TLR7Q9NYK1 1049 aaKnown RBP22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 ZBTB1Q9Y2K1 713 aa22.38■■□□□ 1.17
SDR39U1-220ENST00000556548 CD2BP2O95400 341 aaKnown RBP22.37■■□□□ 1.17
SDR39U1-220ENST00000556548 FOXO4P98177 505 aa22.37■■□□□ 1.17
SDR39U1-220ENST00000556548 CCDC191Q8NCU4 936 aa22.37■■□□□ 1.17
SDR39U1-220ENST00000556548 EIF5BO60841 1220 aaKnown RBP22.37■■□□□ 1.17
SDR39U1-220ENST00000556548 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms