RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 IGKV5-2P06315 115 aa12.83□□□□□ -0.35
NRXN3-213ENST00000556496 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.35
NRXN3-213ENST00000556496 NOL8Q76FK4 1167 aaKnown RBP12.83□□□□□ -0.35
NRXN3-213ENST00000556496 COPS6Q7L5N1 327 aa12.83□□□□□ -0.35
NRXN3-213ENST00000556496 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.35
NRXN3-213ENST00000556496 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.35
NRXN3-213ENST00000556496 UTYO14607 1347 aa12.83□□□□□ -0.36
NRXN3-213ENST00000556496 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
NRXN3-213ENST00000556496 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
NRXN3-213ENST00000556496 HSPA4P34932 840 aa12.83□□□□□ -0.36
NRXN3-213ENST00000556496 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
NRXN3-213ENST00000556496 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
NRXN3-213ENST00000556496 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
NRXN3-213ENST00000556496 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
NRXN3-213ENST00000556496 AACSQ86V21 672 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
NRXN3-213ENST00000556496 MRE11P49959 708 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 MYD88Q99836 296 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
NRXN3-213ENST00000556496 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
NRXN3-213ENST00000556496 RAD50Q92878 1312 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
NRXN3-213ENST00000556496 KIAA1211Q6ZU35 1233 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 AK9Q5TCS8 1911 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 CABP4P57796 275 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 GCKRQ14397 625 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
NRXN3-213ENST00000556496 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
NRXN3-213ENST00000556496 COL18A1P39060 1754 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 SASH1O94885 1247 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 CUL4AQ13619 759 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 LSG1Q9H089 658 aaKnown RBP12.8□□□□□ -0.36
NRXN3-213ENST00000556496 SIL1Q9H173 461 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
NRXN3-213ENST00000556496 ISY1Q9ULR0 285 aaKnown RBP12.8□□□□□ -0.36
NRXN3-213ENST00000556496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.8□□□□□ -0.36
NRXN3-213ENST00000556496 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 CPDO75976 1380 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 EAF2Q96CJ1 260 aaPredicted RBP12.79□□□□□ -0.36
NRXN3-213ENST00000556496 BRINP3Q76B58 766 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 GAS2L3Q86XJ1 694 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
NRXN3-213ENST00000556496 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
NRXN3-213ENST00000556496 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
NRXN3-213ENST00000556496 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
NRXN3-213ENST00000556496 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
NRXN3-213ENST00000556496 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
NRXN3-213ENST00000556496 EVI5LQ96CN4 794 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 ABCC6O95255 1503 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 C5P01031 1676 aa12.78□□□□□ -0.36
NRXN3-213ENST00000556496 MRC1P22897 1456 aa12.77□□□□□ -0.36
NRXN3-213ENST00000556496 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.37
NRXN3-213ENST00000556496 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.37
NRXN3-213ENST00000556496 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.37
NRXN3-213ENST00000556496 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
NRXN3-213ENST00000556496 NCLP19338 710 aaKnown RBP12.76□□□□□ -0.37
NRXN3-213ENST00000556496 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
NRXN3-213ENST00000556496 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
NRXN3-213ENST00000556496 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
NRXN3-213ENST00000556496 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
NRXN3-213ENST00000556496 BRD1O95696 1058 aa12.75□□□□□ -0.37
NRXN3-213ENST00000556496 PTH1RQ03431 593 aa12.75□□□□□ -0.37
NRXN3-213ENST00000556496 WDR17Q8IZU2 1322 aa12.75□□□□□ -0.37
NRXN3-213ENST00000556496 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
NRXN3-213ENST00000556496 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
NRXN3-213ENST00000556496 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
NRXN3-213ENST00000556496 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
NRXN3-213ENST00000556496 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 A0A087WZG4 1122 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 AK2P54819 239 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 TTC14Q96N46 770 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 CASTP20810 708 aaKnown RBP12.74□□□□□ -0.37
NRXN3-213ENST00000556496 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
NRXN3-213ENST00000556496 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 COPRSQ9NQ92 184 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
NRXN3-213ENST00000556496 HIP1O00291 1037 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 CPA1P15085 419 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
NRXN3-213ENST00000556496 PKD1L3Q7Z443 1732 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms