RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
VTI1B-206ENST00000556461 PIM2Q9P1W9 311 aa10.61□□□□□ -0.71
VTI1B-206ENST00000556461 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
VTI1B-206ENST00000556461 FAM177BA6PVY3 158 aa10.6□□□□□ -0.71
VTI1B-206ENST00000556461 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
VTI1B-206ENST00000556461 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
VTI1B-206ENST00000556461 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
VTI1B-206ENST00000556461 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
VTI1B-206ENST00000556461 MBIPQ9NS73 344 aa10.6□□□□□ -0.71
VTI1B-206ENST00000556461 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
VTI1B-206ENST00000556461 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 CNBD1Q8NA66 436 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 BRIP1Q9BX63 1249 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
VTI1B-206ENST00000556461 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
VTI1B-206ENST00000556461 ADCY9O60503 1353 aa10.58□□□□□ -0.72
VTI1B-206ENST00000556461 ERVV-1B6SEH8 477 aa10.58□□□□□ -0.72
VTI1B-206ENST00000556461 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
VTI1B-206ENST00000556461 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
VTI1B-206ENST00000556461 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
VTI1B-206ENST00000556461 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.72
VTI1B-206ENST00000556461 H0YIN7 160 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 RGL2O15211 777 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 GPTP24298 496 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 C8orf58Q8NAV2 365 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 XAGE3Q8WTP9 111 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 ATP10DQ9P241 1426 aa10.57□□□□□ -0.72
VTI1B-206ENST00000556461 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 PDE6BP35913 854 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 PRELPP51888 382 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 GNAI1P63096 354 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 ST5P78524 1137 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 RASSF7Q02833 373 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 AIMP1Q12904 312 aaKnown RBP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 SUSD4Q5VX71 490 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 COPS6Q7L5N1 327 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 ZNF34Q8IZ26 560 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 TTLL6Q8N841 843 aa10.56□□□□□ -0.72
VTI1B-206ENST00000556461 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
VTI1B-206ENST00000556461 NPHP1O15259 732 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 HOXB7P09629 217 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 SRGNP10124 158 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 ERFEQ4G0M1 354 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 GIGYF2Q6Y7W6 1299 aaKnown RBP10.55□□□□□ -0.72
VTI1B-206ENST00000556461 FAM9BQ8IZU0 186 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 ZNF526Q8TF50 670 aaPredicted RBP10.55□□□□□ -0.72
VTI1B-206ENST00000556461 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
VTI1B-206ENST00000556461 ZNF219Q9P2Y4 722 aaPredicted RBP10.55□□□□□ -0.72
VTI1B-206ENST00000556461 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 NUP98P52948 1817 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
VTI1B-206ENST00000556461 CALD1Q05682 793 aaKnown RBP10.54□□□□□ -0.72
VTI1B-206ENST00000556461 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
VTI1B-206ENST00000556461 NFKBIEO00221 500 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 C21orf2O43822 256 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 NTSR2O95665 410 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 STYK1Q6J9G0 422 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 SLC51AQ86UW1 340 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 MASTLQ96GX5 879 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
VTI1B-206ENST00000556461 TNRC6CQ9HCJ0 1690 aaKnown RBP10.53□□□□□ -0.72
VTI1B-206ENST00000556461 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
VTI1B-206ENST00000556461 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
VTI1B-206ENST00000556461 OLFM4Q6UX06 510 aa10.52□□□□□ -0.73
VTI1B-206ENST00000556461 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
VTI1B-206ENST00000556461 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.73
VTI1B-206ENST00000556461 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
VTI1B-206ENST00000556461 RNF181Q9P0P0 153 aa10.52□□□□□ -0.73
VTI1B-206ENST00000556461 DBF4Q9UBU7 674 aaPredicted RBP10.52□□□□□ -0.73
VTI1B-206ENST00000556461 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
VTI1B-206ENST00000556461 NPR1P16066 1061 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 NLRP10Q86W26 655 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
VTI1B-206ENST00000556461 IBTKQ9P2D0 1353 aaPredicted RBP10.51□□□□□ -0.73
VTI1B-206ENST00000556461 ATP5J2-PTCD1G3V325 749 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
VTI1B-206ENST00000556461 PARP10Q53GL7 1025 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 ANKRD13DQ6ZTN6 518 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms