RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 KLF16Q9BXK1 252 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 PNMA6FA0A0J9YX94 578 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 SORBS3O60504 671 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 WDR4P57081 412 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 DAB2P98082 770 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 PSMD2Q13200 908 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 ZNF697Q5TEC3 545 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 TMC4Q7Z404 712 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 TREML1Q86YW5 311 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 SNIP1Q8TAD8 396 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 GPR152Q8TDT2 470 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
SPTLC2-204ENST00000556264 PCSK2P16519 638 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 TXLNAP40222 546 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 NAALADL2Q58DX5 795 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 C1orf53Q5VUE5 145 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 ALG1LQ6GMV1 187 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 ZNF598Q86UK7 904 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 SREK1Q8WXA9 508 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 DRC1Q96MC2 740 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
SPTLC2-204ENST00000556264 J3QL48 77 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 ITGAEP38570 1179 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 C8orf34Q49A92 452 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 GNASQ5JWF2 1037 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 TTC16Q8NEE8 873 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 NUDT16Q96DE0 195 aaKnown RBP6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 CSRNP1Q96S65 589 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 GGNBP2Q9H3C7 697 aa6.39□□□□□ -1.39
SPTLC2-204ENST00000556264 TTC24A2A3L6 582 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 TIMP2P16035 220 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 PLA2G4AP47712 749 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 SPNS2Q8IVW8 549 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 AIDAQ96BJ3 306 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 GRIP2Q9C0E4 1043 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 BCS1LQ9Y276 419 aa6.38□□□□□ -1.39
SPTLC2-204ENST00000556264 A6NHS1 94 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 MICAL2O94851 1124 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 ORC1Q13415 861 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 C4orf17Q53FE4 359 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 RHPN1Q8TCX5 695 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 C7orf43Q8WVR3 580 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 CFHR5Q9BXR6 569 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 FAM13BQ9NYF5 915 aa6.37□□□□□ -1.39
SPTLC2-204ENST00000556264 GNA15P30679 374 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 GPC1P35052 558 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 PHKA2P46019 1235 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 METTL16Q86W50 562 aaKnown RBP6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 NT5DC4Q86YG4 428 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 CYP4X1Q8N118 509 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 PIK3R5Q8WYR1 880 aa6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 INSM2Q96T92 566 aaPredicted RBP6.36□□□□□ -1.39
SPTLC2-204ENST00000556264 OPLAHO14841 1288 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 NEFLP07196 543 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 RNF144AP50876 292 aaPredicted RBP6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 FANCCQ00597 558 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 RAD51AP2Q09MP3 1159 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 ZNF280CQ8ND82 737 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 FBF1Q8TES7 1133 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 RNF34Q969K3 372 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 KLRG1Q96E93 195 aa6.35□□□□□ -1.39
SPTLC2-204ENST00000556264 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 SMPD1P17405 629 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 ZNF76P36508 570 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 HIF1AQ16665 826 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 NBPF1Q3BBV0 1214 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 IFFO2Q5TF58 517 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 SUSD3Q96L08 255 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 DNAJC25Q9H1X3 360 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 METTL5Q9NRN9 209 aaKnown RBP6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 AK5Q9Y6K8 562 aa6.34□□□□□ -1.39
SPTLC2-204ENST00000556264 TNFRSF10AO00220 468 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 GDF9O60383 454 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 TATP17735 454 aaPredicted RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 HSH2DQ96JZ2 352 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 FRMD6Q96NE9 622 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 TSEN34Q9BSV6 310 aaKnown RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 POLMQ9NP87 494 aaPredicted RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 DMGDHQ9UI17 866 aaKnown RBP6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
SPTLC2-204ENST00000556264 SPINT1O43278 529 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 CTSHP09668 335 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 CTSOP43234 321 aaPredicted RBP6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 IDH3AP50213 366 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 POU4F2Q12837 409 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 USPL1Q5W0Q7 1092 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 BICDL1Q6ZP65 573 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms