RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 NR5A1Q13285 461 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
HIF1A-208ENST00000556237 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
HIF1A-208ENST00000556237 FOXJ1Q92949 421 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 SLC12A5Q9H2X9 1139 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 PRKRIP1Q9H875 184 aaPredicted RBP8.63□□□□□ -1.03
HIF1A-208ENST00000556237 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 KNSTRNQ9Y448 316 aa8.63□□□□□ -1.03
HIF1A-208ENST00000556237 CEP170BQ9Y4F5 1589 aaPredicted RBP8.63□□□□□ -1.03
HIF1A-208ENST00000556237 MYO3AQ8NEV4 1616 aa8.62□□□□□ -1.03
HIF1A-208ENST00000556237 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
HIF1A-208ENST00000556237 PLEKHH1Q9ULM0 1364 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 POLR1AO95602 1720 aaPredicted RBP8.61□□□□□ -1.03
HIF1A-208ENST00000556237 MAN1A2O60476 641 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 AGERQ15109 404 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 QPCTQ16769 361 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 ITPKCQ96DU7 683 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
HIF1A-208ENST00000556237 MED14O60244 1454 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 HSPA2P54652 639 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 RALBP1Q15311 655 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 CC2D1BQ5T0F9 858 aaKnown RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
HIF1A-208ENST00000556237 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
HIF1A-208ENST00000556237 UPP2O95045 317 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 NR3C2P08235 984 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 KCNA6P17658 529 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
HIF1A-208ENST00000556237 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 FAM135BQ49AJ0 1406 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 ROBO2Q9HCK4 1378 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
HIF1A-208ENST00000556237 ARHGEF28Q8N1W1 1705 aaKnown RBP8.58□□□□□ -1.04
HIF1A-208ENST00000556237 NPHP4O75161 1426 aaPredicted RBP8.58□□□□□ -1.04
HIF1A-208ENST00000556237 LILRB3O75022 631 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
HIF1A-208ENST00000556237 CABP1Q9NZU7 370 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 QRICH2Q9H0J4 1663 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 PIK3R4Q99570 1358 aa8.58□□□□□ -1.04
HIF1A-208ENST00000556237 BMP2P12643 396 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 GRM5P41594 1212 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 CCDC184Q52MB2 194 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
HIF1A-208ENST00000556237 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 TERF2IPQ9NYB0 399 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 ATAD2Q6PL18 1390 aa8.57□□□□□ -1.04
HIF1A-208ENST00000556237 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
HIF1A-208ENST00000556237 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
HIF1A-208ENST00000556237 TECPR2O15040 1411 aa8.56□□□□□ -1.04
HIF1A-208ENST00000556237 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
HIF1A-208ENST00000556237 ARMC2Q8NEN0 867 aa8.56□□□□□ -1.04
HIF1A-208ENST00000556237 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
HIF1A-208ENST00000556237 PPFIA3O75145 1194 aa8.55□□□□□ -1.04
HIF1A-208ENST00000556237 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
HIF1A-208ENST00000556237 TSC1Q92574 1164 aa8.55□□□□□ -1.04
HIF1A-208ENST00000556237 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
HIF1A-208ENST00000556237 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
HIF1A-208ENST00000556237 ANKRD36BQ8N2N9 1353 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 FSHRP23945 695 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 MAP4K5Q9Y4K4 846 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
HIF1A-208ENST00000556237 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
HIF1A-208ENST00000556237 PARD3Q8TEW0 1356 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NPC1L1Q9UHC9 1359 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 VASH1Q7L8A9 365 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 SH3RF1Q7Z6J0 888 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
HIF1A-208ENST00000556237 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 CPS1P31327 1500 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
HIF1A-208ENST00000556237 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms