RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 AFAP1Q8N556 730 aa17.2■□□□□ 0.34
SIX1-205ENST00000555955 ELP1O95163 1332 aa17.2■□□□□ 0.34
SIX1-205ENST00000555955 UBXN4Q92575 508 aa17.2■□□□□ 0.34
SIX1-205ENST00000555955 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
SIX1-205ENST00000555955 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 DTNBO60941 627 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 SEC31AO94979 1220 aaKnown RBP17.19■□□□□ 0.34
SIX1-205ENST00000555955 LIG1P18858 919 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 LMAN1P49257 510 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 REXO1L1PQ8IX06 675 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 UBXN6Q9BZV1 441 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 CDC25BP30305 580 aa17.19■□□□□ 0.34
SIX1-205ENST00000555955 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
SIX1-205ENST00000555955 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
SIX1-205ENST00000555955 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
SIX1-205ENST00000555955 MAGEA9P43362 315 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 PDE1AP54750 535 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 SNW1Q13573 536 aaKnown RBP17.18■□□□□ 0.34
SIX1-205ENST00000555955 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
SIX1-205ENST00000555955 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 DNAJC25Q9H1X3 360 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.18■□□□□ 0.34
SIX1-205ENST00000555955 AGLP35573 1532 aa17.18■□□□□ 0.34
SIX1-205ENST00000555955 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
SIX1-205ENST00000555955 CCZ1BP86790 482 aa17.17■□□□□ 0.34
SIX1-205ENST00000555955 CCZ1P86791 482 aaPredicted RBP17.17■□□□□ 0.34
SIX1-205ENST00000555955 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
SIX1-205ENST00000555955 DNAJC21Q5F1R6 531 aaKnown RBP17.17■□□□□ 0.34
SIX1-205ENST00000555955 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
SIX1-205ENST00000555955 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
SIX1-205ENST00000555955 DACT1Q9NYF0 836 aa17.17■□□□□ 0.34
SIX1-205ENST00000555955 ACTN2P35609 894 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
SIX1-205ENST00000555955 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 ATP8B1O43520 1251 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 SASH3O75995 380 aa17.16■□□□□ 0.34
SIX1-205ENST00000555955 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 TET3O43151 1660 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
SIX1-205ENST00000555955 VPS37CA5D8V6 355 aaPredicted RBP17.14■□□□□ 0.33
SIX1-205ENST00000555955 ANKRD65E5RJM6 399 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
SIX1-205ENST00000555955 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 PSD3Q9NYI0 1048 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 CCDC91Q7Z6B0 441 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.33
SIX1-205ENST00000555955 CHMLP26374 656 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 IVLP07476 585 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
SIX1-205ENST00000555955 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
SIX1-205ENST00000555955 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
SIX1-205ENST00000555955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
SIX1-205ENST00000555955 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
SIX1-205ENST00000555955 GJB2P29033 226 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 AK2P54819 239 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
SIX1-205ENST00000555955 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
SIX1-205ENST00000555955 SBNO2Q9Y2G9 1366 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 SIGLEC1Q9BZZ2 1709 aa17.12■□□□□ 0.33
SIX1-205ENST00000555955 KRT85P78386 507 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 PPM1EQ8WY54 764 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 E4F1Q66K89 784 aaPredicted RBP17.11■□□□□ 0.33
SIX1-205ENST00000555955 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 PPP1R13BQ96KQ4 1090 aa17.11■□□□□ 0.33
SIX1-205ENST00000555955 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
SIX1-205ENST00000555955 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
SIX1-205ENST00000555955 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
SIX1-205ENST00000555955 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
SIX1-205ENST00000555955 HSPA4P34932 840 aa17.1■□□□□ 0.33
SIX1-205ENST00000555955 RBM43Q6ZSC3 357 aaKnown RBP17.1■□□□□ 0.33
SIX1-205ENST00000555955 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 EPC1Q9H2F5 836 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms