RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
PSEN1-214ENST00000555867 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
PSEN1-214ENST00000555867 WDR43Q15061 677 aaKnown RBP eCLIP8.55□□□□□ -1.04
PSEN1-214ENST00000555867 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-214ENST00000555867 DDX12PQ92771 950 aa8.55□□□□□ -1.04
PSEN1-214ENST00000555867 ANKRD36BQ8N2N9 1353 aa8.55□□□□□ -1.04
PSEN1-214ENST00000555867 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-214ENST00000555867 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 ARHGEF25Q86VW2 580 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 NMRK2Q9NPI5 230 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 CD2APQ9Y5K6 639 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 TNS2Q63HR2 1409 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
PSEN1-214ENST00000555867 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
PSEN1-214ENST00000555867 SLIT3O75094 1523 aa8.53□□□□□ -1.04
PSEN1-214ENST00000555867 NSD3Q9BZ95 1437 aa8.53□□□□□ -1.04
PSEN1-214ENST00000555867 NBR1Q14596 966 aa8.52□□□□□ -1.05
PSEN1-214ENST00000555867 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
PSEN1-214ENST00000555867 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
PSEN1-214ENST00000555867 MAP3K7O43318 606 aa8.51□□□□□ -1.05
PSEN1-214ENST00000555867 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
PSEN1-214ENST00000555867 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
PSEN1-214ENST00000555867 IGSF1Q8N6C5 1336 aa8.51□□□□□ -1.05
PSEN1-214ENST00000555867 ABCC6O95255 1503 aa8.5□□□□□ -1.05
PSEN1-214ENST00000555867 HSPA1AP0DMV8 641 aaKnown RBP8.5□□□□□ -1.05
PSEN1-214ENST00000555867 HSPA1BP0DMV9 641 aaKnown RBP8.5□□□□□ -1.05
PSEN1-214ENST00000555867 PPP4CP60510 307 aa8.5□□□□□ -1.05
PSEN1-214ENST00000555867 PDIA6Q15084 440 aa8.5□□□□□ -1.05
PSEN1-214ENST00000555867 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
PSEN1-214ENST00000555867 SPDYE16A6NNV3 312 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-214ENST00000555867 TSR1Q2NL82 804 aaKnown RBP8.49□□□□□ -1.05
PSEN1-214ENST00000555867 CFAP53Q96M91 514 aa8.49□□□□□ -1.05
PSEN1-214ENST00000555867 TERF2IPQ9NYB0 399 aa8.49□□□□□ -1.05
PSEN1-214ENST00000555867 PDE4DIPQ5VU43 2346 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 IL2RBP14784 551 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
PSEN1-214ENST00000555867 SMIM5Q71RC9 77 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 MORC1Q86VD1 984 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 RCAN3Q9UKA8 241 aa8.48□□□□□ -1.05
PSEN1-214ENST00000555867 PIK3C2AO00443 1686 aa8.47□□□□□ -1.05
PSEN1-214ENST00000555867 LY75O60449 1722 aa8.47□□□□□ -1.05
PSEN1-214ENST00000555867 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-214ENST00000555867 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
PSEN1-214ENST00000555867 MON2Q7Z3U7 1717 aa8.46□□□□□ -1.05
PSEN1-214ENST00000555867 RRP1P56182 461 aaKnown RBP8.46□□□□□ -1.06
PSEN1-214ENST00000555867 PRSS12P56730 875 aa8.46□□□□□ -1.06
PSEN1-214ENST00000555867 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
PSEN1-214ENST00000555867 HDGFL2Q7Z4V5 671 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-214ENST00000555867 DDX54Q8TDD1 881 aaKnown RBP8.46□□□□□ -1.06
PSEN1-214ENST00000555867 SYTL4Q96C24 671 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-214ENST00000555867 CDCA7LQ96GN5 454 aa8.46□□□□□ -1.06
PSEN1-214ENST00000555867 TSHZ2Q9NRE2 1034 aa8.46□□□□□ -1.06
PSEN1-214ENST00000555867 ZNF521Q96K83 1311 aa8.46□□□□□ -1.06
PSEN1-214ENST00000555867 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
PSEN1-214ENST00000555867 CICQ96RK0 1608 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-214ENST00000555867 FSTL1Q12841 308 aa8.45□□□□□ -1.06
PSEN1-214ENST00000555867 TJAP1Q5JTD0 557 aa8.45□□□□□ -1.06
PSEN1-214ENST00000555867 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
PSEN1-214ENST00000555867 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-214ENST00000555867 SLC12A5Q9H2X9 1139 aa8.45□□□□□ -1.06
PSEN1-214ENST00000555867 NFAT5O94916 1531 aa8.44□□□□□ -1.06
PSEN1-214ENST00000555867 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
PSEN1-214ENST00000555867 GFRA3O60609 400 aa8.44□□□□□ -1.06
PSEN1-214ENST00000555867 IRX6P78412 446 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-214ENST00000555867 KCNH5Q8NCM2 988 aa8.44□□□□□ -1.06
PSEN1-214ENST00000555867 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
PSEN1-214ENST00000555867 E9PSI1 815 aa8.43□□□□□ -1.06
PSEN1-214ENST00000555867 SMAPO00193 183 aa8.43□□□□□ -1.06
PSEN1-214ENST00000555867 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
PSEN1-214ENST00000555867 BBXQ8WY36 941 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-214ENST00000555867 IL21Q9HBE4 155 aa8.43□□□□□ -1.06
PSEN1-214ENST00000555867 EDC4Q6P2E9 1401 aaKnown RBP8.43□□□□□ -1.06
PSEN1-214ENST00000555867 CD163L1Q9NR16 1453 aa8.43□□□□□ -1.06
PSEN1-214ENST00000555867 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-214ENST00000555867 TATDN2Q93075 761 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 CCDC136Q96JN2 1154 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
PSEN1-214ENST00000555867 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 FAM198AQ9UFP1 575 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 PNMA3Q9UL41 463 aa8.42□□□□□ -1.06
PSEN1-214ENST00000555867 MAP2P11137 1827 aaKnown RBP8.42□□□□□ -1.06
PSEN1-214ENST00000555867 N4BP2Q86UW6 1770 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-214ENST00000555867 KCPQ6ZWJ8 1503 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 C9orf131Q5VYM1 1079 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 MTRQ99707 1265 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
PSEN1-214ENST00000555867 BCS1LQ9Y276 419 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms