RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 FAM157BP0CG42 384 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 SKIP12755 728 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 AMPD1P23109 780 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 FLIIQ13045 1269 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 CABP1Q9NZU7 370 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
ATXN3-233ENST00000555816 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-233ENST00000555816 GNB5O14775 395 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 MAPTP10636 758 aaKnown RBP8.78□□□□□ -1
ATXN3-233ENST00000555816 ADH6P28332 368 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 LINC00114Q6XXX2 140 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 TRIM50Q86XT4 487 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 ZIC5Q96T25 663 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
ATXN3-233ENST00000555816 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
ATXN3-233ENST00000555816 GTF2IP78347 998 aa8.77□□□□□ -1.01
ATXN3-233ENST00000555816 TEAD4Q15561 434 aa8.77□□□□□ -1.01
ATXN3-233ENST00000555816 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-233ENST00000555816 PROCP04070 461 aa8.76□□□□□ -1.01
ATXN3-233ENST00000555816 ITGB2P05107 769 aa8.76□□□□□ -1.01
ATXN3-233ENST00000555816 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-233ENST00000555816 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-233ENST00000555816 NEURL1BA8MQ27 555 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 PIK3CDO00329 1044 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 ATP1A2P50993 1020 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 BICDL1Q6ZP65 573 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 MARK1Q9P0L2 795 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-233ENST00000555816 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 KHNYNO15037 678 aaKnown RBP8.74□□□□□ -1.01
ATXN3-233ENST00000555816 ADAM23O75077 832 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 PSME1Q06323 249 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 NCOA4Q13772 614 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
ATXN3-233ENST00000555816 COL8A1P27658 744 aa8.73□□□□□ -1.01
ATXN3-233ENST00000555816 NOS2P35228 1153 aa8.73□□□□□ -1.01
ATXN3-233ENST00000555816 DGKGP49619 791 aa8.73□□□□□ -1.01
ATXN3-233ENST00000555816 ZNF468Q5VIY5 522 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-233ENST00000555816 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
ATXN3-233ENST00000555816 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-233ENST00000555816 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-233ENST00000555816 DCDC2BA2VCK2 349 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 M0R2N6 131 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 EFSO43281 561 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 EPHA4P54764 986 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
ATXN3-233ENST00000555816 NEUROD4Q9HD90 331 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-233ENST00000555816 EML1O00423 815 aa8.71□□□□□ -1.02
ATXN3-233ENST00000555816 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.02
ATXN3-233ENST00000555816 CD33P20138 364 aa8.71□□□□□ -1.02
ATXN3-233ENST00000555816 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.02
ATXN3-233ENST00000555816 CHSY3Q70JA7 882 aa8.71□□□□□ -1.02
ATXN3-233ENST00000555816 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
ATXN3-233ENST00000555816 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 ALAS2P22557 587 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 KLF15Q9UIH9 416 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
ATXN3-233ENST00000555816 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-233ENST00000555816 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
ATXN3-233ENST00000555816 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
ATXN3-233ENST00000555816 ANKIB1Q9P2G1 1089 aa8.69□□□□□ -1.02
ATXN3-233ENST00000555816 ELOA3CA0A087WX78 387 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-233ENST00000555816 PALM3A6NDB9 673 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-233ENST00000555816 ELOA3DA6NLF2 546 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-233ENST00000555816 TXLNAP40222 546 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 BAG6P46379 1132 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 HIRAP54198 1017 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-233ENST00000555816 ELOA3BQ3SY89 546 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 SLC9A9Q8IVB4 645 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 ELOA3Q8NG57 546 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
ATXN3-233ENST00000555816 K7ELQ4 463 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-233ENST00000555816 ATP9BO43861 1147 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 SIN3BO75182 1162 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 PSMA6P60900 246 aaKnown RBP8.67□□□□□ -1.02
ATXN3-233ENST00000555816 NEUROD1Q13562 356 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 HDGFL1Q5TGJ6 251 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 PARP3Q9Y6F1 533 aa8.67□□□□□ -1.02
ATXN3-233ENST00000555816 USP17L3A6NCW0 530 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 USP17L4A6NCW7 530 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 SPDYE3A6NKU9 549 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
ATXN3-233ENST00000555816 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
ATXN3-233ENST00000555816 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms