RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 TEX13AQ9BXU3 409 aaPredicted RBP25.66■■□□□ 1.7
SUPT16H-203ENST00000555752 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
SUPT16H-203ENST00000555752 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
SUPT16H-203ENST00000555752 ST5P78524 1137 aa25.65■■□□□ 1.7
SUPT16H-203ENST00000555752 MASTLQ96GX5 879 aa25.65■■□□□ 1.7
SUPT16H-203ENST00000555752 TAF1DQ9H5J8 278 aaPredicted RBP25.65■■□□□ 1.7
SUPT16H-203ENST00000555752 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
SUPT16H-203ENST00000555752 VEGFBP49765 207 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 OLFM4Q6UX06 510 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 LDHDQ86WU2 507 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 DZIP3Q86Y13 1208 aaKnown RBP25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 C7orf43Q8WVR3 580 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 FMNL2Q96PY5 1086 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 SCN4AP35499 1836 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 ZNF541Q9H0D2 1346 aa25.63■■□□□ 1.69
SUPT16H-203ENST00000555752 U2SURPO15042 1029 aaKnown RBP25.62■■□□□ 1.69
SUPT16H-203ENST00000555752 L3MBTL3Q96JM7 780 aaPredicted RBP25.62■■□□□ 1.69
SUPT16H-203ENST00000555752 KIF7Q2M1P5 1343 aa25.62■■□□□ 1.69
SUPT16H-203ENST00000555752 IQCA1LA6NCM1 817 aa25.61■■□□□ 1.69
SUPT16H-203ENST00000555752 ITGBL1O95965 494 aaPredicted RBP25.61■■□□□ 1.69
SUPT16H-203ENST00000555752 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
SUPT16H-203ENST00000555752 SOGA3Q5TF21 947 aa25.61■■□□□ 1.69
SUPT16H-203ENST00000555752 PRAMEF22A3QJZ6 481 aa25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 PER1O15534 1290 aaPredicted RBP25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 EAPPQ56P03 285 aaPredicted RBP25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 NPM2Q86SE8 214 aaKnown RBP25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 ZNF277Q9NRM2 450 aaPredicted RBP25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 USP16Q9Y5T5 823 aa25.6■■□□□ 1.69
SUPT16H-203ENST00000555752 CCDC93Q567U6 631 aa25.59■■□□□ 1.69
SUPT16H-203ENST00000555752 PRDM10Q9NQV6 1147 aa25.59■■□□□ 1.69
SUPT16H-203ENST00000555752 TMEM88BA6NKF7 163 aa25.58■■□□□ 1.69
SUPT16H-203ENST00000555752 NBPF5PQ86XG9 351 aaPredicted RBP25.58■■□□□ 1.69
SUPT16H-203ENST00000555752 CEMIPQ8WUJ3 1361 aa25.57■■□□□ 1.68
SUPT16H-203ENST00000555752 BTBD11A6QL63 1104 aa25.57■■□□□ 1.68
SUPT16H-203ENST00000555752 ADAMTSL1Q8N6G6 1762 aa25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 CTCFP49711 727 aaPredicted RBP25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 FKBP4Q02790 459 aaKnown RBP eCLIP25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 AIDAQ96BJ3 306 aa25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 PHACTR3Q96KR7 559 aa25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 CLEC11AQ9Y240 323 aa25.56■■□□□ 1.68
SUPT16H-203ENST00000555752 LBX1P52954 281 aa25.55■■□□□ 1.68
SUPT16H-203ENST00000555752 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
SUPT16H-203ENST00000555752 NPR1P16066 1061 aa25.54■■□□□ 1.68
SUPT16H-203ENST00000555752 WBP1LQ9NX94 342 aa25.54■■□□□ 1.68
SUPT16H-203ENST00000555752 HACL1Q9UJ83 578 aa25.54■■□□□ 1.68
SUPT16H-203ENST00000555752 RNF123Q5XPI4 1314 aa25.54■■□□□ 1.68
SUPT16H-203ENST00000555752 EPHX2P34913 555 aa25.53■■□□□ 1.68
SUPT16H-203ENST00000555752 MAP1SQ66K74 1059 aaPredicted RBP25.53■■□□□ 1.68
SUPT16H-203ENST00000555752 KLRG2A4D1S0 409 aaPredicted RBP25.52■■□□□ 1.68
SUPT16H-203ENST00000555752 CLEC4GQ6UXB4 293 aa25.52■■□□□ 1.68
SUPT16H-203ENST00000555752 NIP7Q9Y221 180 aaKnown RBP eCLIP25.51■■□□□ 1.67
SUPT16H-203ENST00000555752 NBPF26B4DH59 902 aa25.5■■□□□ 1.67
SUPT16H-203ENST00000555752 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
SUPT16H-203ENST00000555752 NBPF10Q6P3W6 841 aaKnown RBP25.5■■□□□ 1.67
SUPT16H-203ENST00000555752 CNTROBQ8N137 903 aa25.5■■□□□ 1.67
SUPT16H-203ENST00000555752 NBPF15Q8N660 670 aa25.5■■□□□ 1.67
SUPT16H-203ENST00000555752 IARSP41252 1262 aaKnown RBP25.49■■□□□ 1.67
SUPT16H-203ENST00000555752 SYNE4Q8N205 404 aa25.49■■□□□ 1.67
SUPT16H-203ENST00000555752 ZNF652Q9Y2D9 606 aa25.49■■□□□ 1.67
SUPT16H-203ENST00000555752 RASSF10A6NK89 507 aa25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 FZD9O00144 591 aa25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 HSPA8P11142 646 aaKnown RBP25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 DEFB115Q30KQ5 88 aa25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 TPTE2Q6XPS3 522 aa25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 RTKN2Q8IZC4 609 aa25.48■■□□□ 1.67
SUPT16H-203ENST00000555752 SNRPA1P09661 255 aaKnown RBP25.47■■□□□ 1.67
SUPT16H-203ENST00000555752 HLFQ16534 295 aa25.47■■□□□ 1.67
SUPT16H-203ENST00000555752 MCM10Q7L590 875 aa25.47■■□□□ 1.67
SUPT16H-203ENST00000555752 RSPH6AQ9H0K4 717 aa25.47■■□□□ 1.67
SUPT16H-203ENST00000555752 COL4A5P29400 1685 aa25.47■■□□□ 1.67
SUPT16H-203ENST00000555752 FMR1Q06787 632 aaKnown RBP eCLIP25.46■■□□□ 1.673e-8■■■■■ 41
SUPT16H-203ENST00000555752 PNMA8AQ86V59 439 aaPredicted RBP25.46■■□□□ 1.67
SUPT16H-203ENST00000555752 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
SUPT16H-203ENST00000555752 ABT1Q9ULW3 272 aaKnown RBP25.45■■□□□ 1.66
SUPT16H-203ENST00000555752 WDR33Q9C0J8 1336 aaKnown RBP25.44■■□□□ 1.66
SUPT16H-203ENST00000555752 LTBP1Q14766 1721 aa25.44■■□□□ 1.66
SUPT16H-203ENST00000555752 SLC51AQ86UW1 340 aa25.44■■□□□ 1.66
SUPT16H-203ENST00000555752 GPC2Q8N158 579 aa25.44■■□□□ 1.66
SUPT16H-203ENST00000555752 ABHD8Q96I13 439 aa25.44■■□□□ 1.66
SUPT16H-203ENST00000555752 DCTN1Q14203 1278 aa25.43■■□□□ 1.66
SUPT16H-203ENST00000555752 ABCC12Q96J65 1359 aa25.43■■□□□ 1.66
SUPT16H-203ENST00000555752 GJA3Q9Y6H8 435 aa25.42■■□□□ 1.66
SUPT16H-203ENST00000555752 ALDH1B1P30837 517 aa25.41■■□□□ 1.66
SUPT16H-203ENST00000555752 NUTM1Q86Y26 1132 aa25.41■■□□□ 1.66
SUPT16H-203ENST00000555752 NPC1L1Q9UHC9 1359 aa25.41■■□□□ 1.66
SUPT16H-203ENST00000555752 GTF2E1P29083 439 aaPredicted RBP25.4■■□□□ 1.66
SUPT16H-203ENST00000555752 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
SUPT16H-203ENST00000555752 DDX21Q9NR30 783 aaKnown RBP eCLIP25.4■■□□□ 1.66
SUPT16H-203ENST00000555752 MAP2K1Q02750 393 aaPredicted RBP25.39■■□□□ 1.66
SUPT16H-203ENST00000555752 JDP2Q8WYK2 163 aa25.39■■□□□ 1.66
SUPT16H-203ENST00000555752 PSMD1Q99460 953 aa25.39■■□□□ 1.66
SUPT16H-203ENST00000555752 EPS15P42566 896 aa25.38■■□□□ 1.65
SUPT16H-203ENST00000555752 NGEFQ8N5V2 710 aa25.38■■□□□ 1.65
SUPT16H-203ENST00000555752 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
SUPT16H-203ENST00000555752 RTF1Q92541 710 aaKnown RBP25.38■■□□□ 1.65
SUPT16H-203ENST00000555752 RGL2O15211 777 aa25.37■■□□□ 1.65
SUPT16H-203ENST00000555752 SCNN1DP51172 638 aa25.37■■□□□ 1.65
SUPT16H-203ENST00000555752 GRM1Q13255 1194 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms