RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 MRC1P22897 1456 aa11.39□□□□□ -0.59
NEK9-206ENST00000555537 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
NEK9-206ENST00000555537 HSPA5P11021 654 aaKnown RBP11.39□□□□□ -0.59
NEK9-206ENST00000555537 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
NEK9-206ENST00000555537 IL17REQ8NFR9 667 aa11.39□□□□□ -0.59
NEK9-206ENST00000555537 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
NEK9-206ENST00000555537 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
NEK9-206ENST00000555537 VIRMAQ69YN4 1812 aaKnown RBP11.38□□□□□ -0.59
NEK9-206ENST00000555537 KCNQ3O43525 872 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 EPHX2P34913 555 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
NEK9-206ENST00000555537 ST5P78524 1137 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEK9-206ENST00000555537 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 HEG1Q9ULI3 1381 aa11.38□□□□□ -0.59
NEK9-206ENST00000555537 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
NEK9-206ENST00000555537 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
NEK9-206ENST00000555537 CCDC85CA6NKD9 419 aa11.37□□□□□ -0.59
NEK9-206ENST00000555537 FAM177BA6PVY3 158 aa11.37□□□□□ -0.59
NEK9-206ENST00000555537 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
NEK9-206ENST00000555537 RASSF10A6NK89 507 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 EIF4G2P78344 907 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEK9-206ENST00000555537 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEK9-206ENST00000555537 TEFQ10587 303 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 GRM1Q13255 1194 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 CCDC93Q567U6 631 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 SOGA3Q5TF21 947 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
NEK9-206ENST00000555537 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
NEK9-206ENST00000555537 TEX13AQ9BXU3 409 aaPredicted RBP11.36□□□□□ -0.59
NEK9-206ENST00000555537 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
NEK9-206ENST00000555537 SCN4AP35499 1836 aa11.35□□□□□ -0.59
NEK9-206ENST00000555537 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
NEK9-206ENST00000555537 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
NEK9-206ENST00000555537 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
NEK9-206ENST00000555537 NBPF5PQ86XG9 351 aaPredicted RBP11.35□□□□□ -0.59
NEK9-206ENST00000555537 SYNE4Q8N205 404 aa11.35□□□□□ -0.59
NEK9-206ENST00000555537 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
NEK9-206ENST00000555537 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
NEK9-206ENST00000555537 NPR1P16066 1061 aa11.34□□□□□ -0.59
NEK9-206ENST00000555537 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
NEK9-206ENST00000555537 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
NEK9-206ENST00000555537 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
NEK9-206ENST00000555537 FMNL2Q96PY5 1086 aa11.34□□□□□ -0.59
NEK9-206ENST00000555537 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
NEK9-206ENST00000555537 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
NEK9-206ENST00000555537 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
NEK9-206ENST00000555537 FZD9O00144 591 aa11.33□□□□□ -0.6
NEK9-206ENST00000555537 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
NEK9-206ENST00000555537 MLLT1Q03111 559 aaPredicted RBP11.33□□□□□ -0.6
NEK9-206ENST00000555537 CC2D1BQ5T0F9 858 aaKnown RBP11.33□□□□□ -0.6
NEK9-206ENST00000555537 CYP4F22Q6NT55 531 aa11.33□□□□□ -0.6
NEK9-206ENST00000555537 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
NEK9-206ENST00000555537 DDX21Q9NR30 783 aaKnown RBP eCLIP11.33□□□□□ -0.6
NEK9-206ENST00000555537 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
NEK9-206ENST00000555537 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
NEK9-206ENST00000555537 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
NEK9-206ENST00000555537 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
NEK9-206ENST00000555537 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
NEK9-206ENST00000555537 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
NEK9-206ENST00000555537 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
NEK9-206ENST00000555537 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
NEK9-206ENST00000555537 TRAF5O00463 557 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 AOC2O75106 756 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 EPS15P42566 896 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 CST9Q5W186 159 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 GPC2Q8N158 579 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
NEK9-206ENST00000555537 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
NEK9-206ENST00000555537 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 RGS19P49795 217 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 HLFQ16534 295 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 NBPF10Q6P3W6 841 aaKnown RBP11.3□□□□□ -0.6
NEK9-206ENST00000555537 CLEC4GQ6UXB4 293 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 NBPF15Q8N660 670 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 JDP2Q8WYK2 163 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 PHACTR3Q96KR7 559 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
NEK9-206ENST00000555537 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
NEK9-206ENST00000555537 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
NEK9-206ENST00000555537 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
NEK9-206ENST00000555537 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
NEK9-206ENST00000555537 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
NEK9-206ENST00000555537 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
NEK9-206ENST00000555537 COL4A5P29400 1685 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
NEK9-206ENST00000555537 ECE1P42892 770 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 SCNN1DP51172 638 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 LTBP1Q14766 1721 aa11.28□□□□□ -0.6
NEK9-206ENST00000555537 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
NEK9-206ENST00000555537 BCORQ6W2J9 1755 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms