RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 IFIT2P09913 472 aaKnown RBP12□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
RPGRIP1-208ENST00000555489 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 HS1BP3Q53T59 392 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 LRSAM1Q6UWE0 723 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 EVI5LQ96CN4 794 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 TTC14Q96N46 770 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 LIMCH1Q9UPQ0 1083 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 C1orf167Q5SNV9 1468 aa11.99□□□□□ -0.49
RPGRIP1-208ENST00000555489 PHF14O94880 888 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 NOL8Q76FK4 1167 aaKnown RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 RAPGEF4Q8WZA2 1011 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 TM6SF1Q9BZW5 370 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 XPCQ01831 940 aaPredicted RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 CWF19L2Q2TBE0 894 aaKnown RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
RPGRIP1-208ENST00000555489 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZNF790Q6PG37 636 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZSCAN30Q86W11 494 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 NPHP3Q7Z494 1330 aa11.97□□□□□ -0.49
RPGRIP1-208ENST00000555489 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 AK2P54819 239 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 AACSQ86V21 672 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 KCNB2Q92953 911 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 SLC52A2Q9HAB3 445 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
RPGRIP1-208ENST00000555489 ZKSCAN1P17029 563 aaPredicted RBP11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 PDIA6Q15084 440 aa11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 RIC3Q7Z5B4 369 aa11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 PROSER2Q86WR7 435 aaPredicted RBP11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 SUCLG2Q96I99 432 aa11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 PDLIM2Q96JY6 352 aa11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 RBSNQ9H1K0 784 aa11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.5
RPGRIP1-208ENST00000555489 SYCE3A1L190 88 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 TATP17735 454 aaPredicted RBP11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 DCCP43146 1447 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 MRC1P22897 1456 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 MSNP26038 577 aaKnown RBP11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 SMC3Q9UQE7 1217 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 CYP46A1Q9Y6A2 500 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 CCDC171Q6TFL3 1326 aa11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
RPGRIP1-208ENST00000555489 KDM6AO15550 1401 aaPredicted RBP11.94□□□□□ -0.5
RPGRIP1-208ENST00000555489 ZSCAN22P10073 491 aaPredicted RBP11.94□□□□□ -0.5
RPGRIP1-208ENST00000555489 PHKG2P15735 406 aa11.94□□□□□ -0.5
RPGRIP1-208ENST00000555489 KAZALD1Q96I82 304 aa11.94□□□□□ -0.5
RPGRIP1-208ENST00000555489 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
RPGRIP1-208ENST00000555489 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 STX6O43752 255 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 SASH1O94885 1247 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 COL15A1P39059 1388 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 NECTIN1Q15223 517 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 NSFL1CQ9UNZ2 370 aaKnown RBP11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 IGKV5-2P06315 115 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 PSMA5P28066 241 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 RNF20Q5VTR2 975 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 PDRG1Q9NUG6 133 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
RPGRIP1-208ENST00000555489 C5P01031 1676 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 SYT1P21579 422 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 PTH1RQ03431 593 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 GCKRQ14397 625 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms