RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 BEND3Q5T5X7 828 aa13.99□□□□□ -0.17
XRCC3-213ENST00000555451 NBPF14Q5TI25 921 aa13.99□□□□□ -0.17
XRCC3-213ENST00000555451 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
XRCC3-213ENST00000555451 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
XRCC3-213ENST00000555451 MEIS3Q99687 375 aa13.99□□□□□ -0.17
XRCC3-213ENST00000555451 NBPF26B4DH59 902 aa13.98□□□□□ -0.17
XRCC3-213ENST00000555451 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
XRCC3-213ENST00000555451 NBPF10Q6P3W6 841 aaKnown RBP13.98□□□□□ -0.17
XRCC3-213ENST00000555451 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
XRCC3-213ENST00000555451 NBPF15Q8N660 670 aa13.98□□□□□ -0.17
XRCC3-213ENST00000555451 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
XRCC3-213ENST00000555451 A1BGP04217 495 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
XRCC3-213ENST00000555451 NEXNQ0ZGT2 675 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
XRCC3-213ENST00000555451 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 METTL22Q9BUU2 404 aaPredicted RBP13.97□□□□□ -0.17
XRCC3-213ENST00000555451 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
XRCC3-213ENST00000555451 COL5A3P25940 1745 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-213ENST00000555451 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
XRCC3-213ENST00000555451 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-213ENST00000555451 GNAI2P04899 355 aa13.96□□□□□ -0.17
XRCC3-213ENST00000555451 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-213ENST00000555451 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-213ENST00000555451 SIK1P57059 783 aa13.96□□□□□ -0.17
XRCC3-213ENST00000555451 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.17
XRCC3-213ENST00000555451 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
XRCC3-213ENST00000555451 LY75O60449 1722 aa13.95□□□□□ -0.18
XRCC3-213ENST00000555451 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
XRCC3-213ENST00000555451 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
XRCC3-213ENST00000555451 ANKRD44Q8N8A2 993 aa13.95□□□□□ -0.18
XRCC3-213ENST00000555451 USP44Q9H0E7 712 aa13.95□□□□□ -0.18
XRCC3-213ENST00000555451 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
XRCC3-213ENST00000555451 AFDNP55196 1824 aaKnown RBP13.94□□□□□ -0.18
XRCC3-213ENST00000555451 CEP85Q6P2H3 762 aa13.94□□□□□ -0.18
XRCC3-213ENST00000555451 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
XRCC3-213ENST00000555451 HMMRO75330 724 aa13.93□□□□□ -0.18
XRCC3-213ENST00000555451 IL6STP40189 918 aaPredicted RBP13.93□□□□□ -0.18
XRCC3-213ENST00000555451 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
XRCC3-213ENST00000555451 MYD88Q99836 296 aa13.93□□□□□ -0.18
XRCC3-213ENST00000555451 UTYO14607 1347 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 KIF6Q6ZMV9 814 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
XRCC3-213ENST00000555451 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 STK32BQ9NY57 414 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-213ENST00000555451 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-213ENST00000555451 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
XRCC3-213ENST00000555451 GRM8O00222 908 aa13.91□□□□□ -0.18
XRCC3-213ENST00000555451 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
XRCC3-213ENST00000555451 KCNQ4P56696 695 aa13.91□□□□□ -0.18
XRCC3-213ENST00000555451 ITPK1Q13572 414 aa13.91□□□□□ -0.18
XRCC3-213ENST00000555451 CWF19L2Q2TBE0 894 aaKnown RBP13.91□□□□□ -0.18
XRCC3-213ENST00000555451 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
XRCC3-213ENST00000555451 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.18
XRCC3-213ENST00000555451 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
XRCC3-213ENST00000555451 GCKRQ14397 625 aa13.9□□□□□ -0.18
XRCC3-213ENST00000555451 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
XRCC3-213ENST00000555451 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
XRCC3-213ENST00000555451 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-213ENST00000555451 LRRFIP2Q9Y608 721 aaKnown RBP13.9□□□□□ -0.18
XRCC3-213ENST00000555451 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
XRCC3-213ENST00000555451 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.19
XRCC3-213ENST00000555451 NBPF7P0C2Y1 421 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-213ENST00000555451 ATP8B2P98198 1209 aa13.89□□□□□ -0.19
XRCC3-213ENST00000555451 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
XRCC3-213ENST00000555451 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
XRCC3-213ENST00000555451 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
XRCC3-213ENST00000555451 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
XRCC3-213ENST00000555451 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
XRCC3-213ENST00000555451 TAF1LQ8IZX4 1826 aa13.88□□□□□ -0.19
XRCC3-213ENST00000555451 COL15A1P39059 1388 aa13.88□□□□□ -0.19
XRCC3-213ENST00000555451 ERVV-1B6SEH8 477 aa13.88□□□□□ -0.19
XRCC3-213ENST00000555451 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
XRCC3-213ENST00000555451 GIGYF2Q6Y7W6 1299 aaKnown RBP13.88□□□□□ -0.19
XRCC3-213ENST00000555451 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
XRCC3-213ENST00000555451 NUCB1Q02818 461 aa13.87□□□□□ -0.19
XRCC3-213ENST00000555451 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
XRCC3-213ENST00000555451 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
XRCC3-213ENST00000555451 MTX1Q13505 466 aa13.87□□□□□ -0.19
XRCC3-213ENST00000555451 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
XRCC3-213ENST00000555451 DZIP3Q86Y13 1208 aaKnown RBP13.87□□□□□ -0.19
XRCC3-213ENST00000555451 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
XRCC3-213ENST00000555451 CWC25Q9NXE8 425 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-213ENST00000555451 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 CASZ1Q86V15 1759 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 NUP98P52948 1817 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 A0A087WZG4 1122 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
XRCC3-213ENST00000555451 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
XRCC3-213ENST00000555451 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
XRCC3-213ENST00000555451 RGS3P49796 1198 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms