RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
TMEM253-205ENST00000555314 A1BGP04217 495 aa16.8■□□□□ 0.28
TMEM253-205ENST00000555314 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
TMEM253-205ENST00000555314 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
TMEM253-205ENST00000555314 IQCA1LA6NCM1 817 aa16.79■□□□□ 0.28
TMEM253-205ENST00000555314 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
TMEM253-205ENST00000555314 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
TMEM253-205ENST00000555314 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
TMEM253-205ENST00000555314 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
TMEM253-205ENST00000555314 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
TMEM253-205ENST00000555314 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
TMEM253-205ENST00000555314 NPHP1O15259 732 aa16.78■□□□□ 0.28
TMEM253-205ENST00000555314 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
TMEM253-205ENST00000555314 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
TMEM253-205ENST00000555314 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
TMEM253-205ENST00000555314 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
TMEM253-205ENST00000555314 NPR1P16066 1061 aa16.76■□□□□ 0.27
TMEM253-205ENST00000555314 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
TMEM253-205ENST00000555314 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
TMEM253-205ENST00000555314 DDNO94850 711 aaPredicted RBP16.75■□□□□ 0.27
TMEM253-205ENST00000555314 CCDC93Q567U6 631 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 LDHDQ86WU2 507 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
TMEM253-205ENST00000555314 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 RSPH6AQ9H0K4 717 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
TMEM253-205ENST00000555314 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
TMEM253-205ENST00000555314 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
TMEM253-205ENST00000555314 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
TMEM253-205ENST00000555314 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
TMEM253-205ENST00000555314 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
TMEM253-205ENST00000555314 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
TMEM253-205ENST00000555314 KCNQ3O43525 872 aa16.73■□□□□ 0.27
TMEM253-205ENST00000555314 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
TMEM253-205ENST00000555314 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
TMEM253-205ENST00000555314 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
TMEM253-205ENST00000555314 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
TMEM253-205ENST00000555314 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
TMEM253-205ENST00000555314 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
TMEM253-205ENST00000555314 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
TMEM253-205ENST00000555314 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
TMEM253-205ENST00000555314 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
TMEM253-205ENST00000555314 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
TMEM253-205ENST00000555314 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
TMEM253-205ENST00000555314 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
TMEM253-205ENST00000555314 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
TMEM253-205ENST00000555314 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
TMEM253-205ENST00000555314 CAPN15O75808 1086 aa16.69■□□□□ 0.26
TMEM253-205ENST00000555314 ITGBL1O95965 494 aaPredicted RBP16.69■□□□□ 0.26
TMEM253-205ENST00000555314 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
TMEM253-205ENST00000555314 CC2D2BQ6DHV5 1058 aa16.69■□□□□ 0.26
TMEM253-205ENST00000555314 MKRN1Q9UHC7 482 aaKnown RBP16.69■□□□□ 0.26
TMEM253-205ENST00000555314 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
TMEM253-205ENST00000555314 COL11A2P13942 1736 aaPredicted RBP16.69■□□□□ 0.26
TMEM253-205ENST00000555314 VIRMAQ69YN4 1812 aaKnown RBP16.68■□□□□ 0.26
TMEM253-205ENST00000555314 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
TMEM253-205ENST00000555314 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
TMEM253-205ENST00000555314 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
TMEM253-205ENST00000555314 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
TMEM253-205ENST00000555314 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
TMEM253-205ENST00000555314 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
TMEM253-205ENST00000555314 FZD9O00144 591 aa16.67■□□□□ 0.26
TMEM253-205ENST00000555314 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
TMEM253-205ENST00000555314 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
TMEM253-205ENST00000555314 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
TMEM253-205ENST00000555314 PSMD1Q99460 953 aa16.67■□□□□ 0.26
TMEM253-205ENST00000555314 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
TMEM253-205ENST00000555314 CCDC88AQ3V6T2 1871 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 MCM10Q7L590 875 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 GPC2Q8N158 579 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 NYXQ9GZU5 481 aa16.66■□□□□ 0.26
TMEM253-205ENST00000555314 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
TMEM253-205ENST00000555314 EPHX2P34913 555 aa16.65■□□□□ 0.26
TMEM253-205ENST00000555314 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
TMEM253-205ENST00000555314 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
TMEM253-205ENST00000555314 PNISRQ8TF01 805 aaKnown RBP16.65■□□□□ 0.26
TMEM253-205ENST00000555314 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 SCN4AP35499 1836 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
TMEM253-205ENST00000555314 AIDAQ96BJ3 306 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 WBP1LQ9NX94 342 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 ZNF541Q9H0D2 1346 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
TMEM253-205ENST00000555314 FOXN1O15353 648 aa16.63■□□□□ 0.25
TMEM253-205ENST00000555314 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
TMEM253-205ENST00000555314 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
TMEM253-205ENST00000555314 VEGFBP49765 207 aa16.63■□□□□ 0.25
TMEM253-205ENST00000555314 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
TMEM253-205ENST00000555314 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
TMEM253-205ENST00000555314 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
TMEM253-205ENST00000555314 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
TMEM253-205ENST00000555314 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
TMEM253-205ENST00000555314 HLFQ16534 295 aa16.62■□□□□ 0.25
TMEM253-205ENST00000555314 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms